Gene Information

Name : sfaX (ECABU_c12050)
Accession : YP_006105302.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : HTH-type transcriptional regulator SfaX
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1223978 - 1224478 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence :
ATGAATAACACAGACACATTAGAAAAAATAATCAGACACCAAAAAAACAAAGACCCCGCATATCCCTTTCAGGAACATTT
GTTGATGCAACTCTGTATTCGCGCAAATAAAAGGATGCAGGATAATATATCTGAATTTCTGGGGGCGTATGGAATAAATC
ACTCAGTGTACATGGTTCTCACCACATTATTCACAGCGGAGAGTCATTGTCTGTCACCTTCAGAGATAAGCCAGAAACTG
CAGTTTACCAGAACTAATATTACCCGCATTACAGATTTTTTAGAAAAAACCGGATATGTAAAAAGGACGGATAGCAGGGA
GGATCGCCGTGCTAAAAAAATCAGTCTGACATCTGAAGGTATGTTTTTTATTCAGAGGCTCACTCTTGCACAAAGCATGT
ATCTGAAAGAAATCTGGGGTTATCTGACCCATGATGAACAGGAACTGTTTGAAGTCATTAATAAAAAATTACTGGCGCAT
CTTGATGATGTCAGCTCATAA

Protein sequence :
MNNTDTLEKIIRHQKNKDPAYPFQEHLLMQLCIRANKRMQDNISEFLGAYGINHSVYMVLTTLFTAESHCLSPSEISQKL
QFTRTNITRITDFLEKTGYVKRTDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAH
LDDVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fooX AAT48696.1 putative regulatory protein Not tested PAI I 4787 Protein 2e-75 100
fotX AAT48705.1 FotX protein Not tested PAI II 4787 Protein 6e-75 99
sfaX CAC43423.1 SfaX protein Virulence PAI III 536 Protein 1e-74 99
prfX CAD42022.1 PrfX protein Virulence PAI II 536 Protein 7e-74 97
papX NP_755457.1 PapX protein Virulence PAI I CFT073 Protein 3e-72 97
ECUMN_3330 YP_002414008.1 putative HTH-type transcriptional regulator Not tested Not named Protein 3e-72 97
prsX CAD33722.1 PrsX protein Not tested PAI I 536 Protein 1e-73 96
APECO1_1713 YP_851471.1 hypothetical protein Not tested PAI III APEC-O1 Protein 1e-32 47
unnamed CAD66213.1 putative MarR-family transcriptional regulator Not tested PAI III 536 Protein 8e-33 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sfaX YP_006105302.1 HTH-type transcriptional regulator SfaX VFG1649 Protein 4e-75 99
sfaX YP_006105302.1 HTH-type transcriptional regulator SfaX VFG1541 Protein 3e-74 97
sfaX YP_006105302.1 HTH-type transcriptional regulator SfaX VFG1713 Protein 7e-73 97
sfaX YP_006105302.1 HTH-type transcriptional regulator SfaX VFG1463 Protein 5e-74 96
sfaX YP_006105302.1 HTH-type transcriptional regulator SfaX VFG1688 Protein 3e-33 47