Gene Information

Name : ECABU_c32610 (ECABU_c32610)
Accession : YP_006107260.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : MarR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3331272 - 3331772 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence :
ATGAATAACACAGACACATTAGAAAAAATAATCAGACACCAAAAAAACAAAGACCCCGCATATCCCTTTCGGGAACATTT
GTTGATGCAGCTCTGTATTCGCACAAATAAAAGAATGCAGGATAATATATCTGAATTTCTGGGGGTGTATGGAATAAATC
ACTCAGCATATATGGTTCTCACCACATTATTCGCAGCGGAGAACCATTGTCTGTCACCTTCAGAGATAAGCCAGAAACTT
CAGTTTACCAGAACTAATATTACCCGCATTACAGATTTTTTAGAAAAAGCCGGATATGTAAAAAGGACGGATAGCAGGGA
GGATCGCCGTGCTAAAAAAATCAGTCTGACATCTGAAGGTATGTTTTTTATTCAGAGGCTCACTCTTGCACAAAGCATGT
ATCTGAAAGAAATCTGGGATTATCTGACCCATGATGAACAGGAACTGTTTGAAGTCATTAATAAAAAGTTACTGGCACAT
TTTTCTGATGCCAGCTCATAA

Protein sequence :
MNNTDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSAYMVLTTLFAAENHCLSPSEISQKL
QFTRTNITRITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWDYLTHDEQELFEVINKKLLAH
FSDASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfX CAD42022.1 PrfX protein Virulence PAI II 536 Protein 9e-73 96
papX NP_755457.1 PapX protein Virulence PAI I CFT073 Protein 4e-71 96
ECUMN_3330 YP_002414008.1 putative HTH-type transcriptional regulator Not tested Not named Protein 4e-71 96
prsX CAD33722.1 PrsX protein Not tested PAI I 536 Protein 2e-72 95
fooX AAT48696.1 putative regulatory protein Not tested PAI I 4787 Protein 5e-72 94
sfaX CAC43423.1 SfaX protein Virulence PAI III 536 Protein 3e-72 94
fotX AAT48705.1 FotX protein Not tested PAI II 4787 Protein 2e-72 94
APECO1_1713 YP_851471.1 hypothetical protein Not tested PAI III APEC-O1 Protein 1e-31 46
unnamed CAD66213.1 putative MarR-family transcriptional regulator Not tested PAI III 536 Protein 1e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c32610 YP_006107260.1 MarR family transcriptional regulator VFG1541 Protein 4e-73 96
ECABU_c32610 YP_006107260.1 MarR family transcriptional regulator VFG1713 Protein 1e-71 96
ECABU_c32610 YP_006107260.1 MarR family transcriptional regulator VFG1463 Protein 7e-73 95
ECABU_c32610 YP_006107260.1 MarR family transcriptional regulator VFG1649 Protein 1e-72 94
ECABU_c32610 YP_006107260.1 MarR family transcriptional regulator VFG1688 Protein 4e-32 46