Gene Information

Name : ECABU_c32740 (ECABU_c32740)
Accession : YP_006107273.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3338665 - 3339225 bp
Length : 561 bp
Strand : +
Note : TetR family

DNA sequence :
GTGTCTACTTATGAGAATATACTTCGCATAACGGATACTCTGATCCAGCAACGCGGATTTTTGGGGTTCAGTTACGCAGA
TCTGGAAAAAGAAATTGGTATCAGAAAAGCCAGTATTCATCACCATTTCCCGAGGAAAACTGATCTTGGTATAGCCTACT
GCCAATACAAAACAGAAGTATTTGATAGACTTAATATAACTCTCCATAATGTTTCTTCAGGTGTACAACGTCTCAGGACA
TATCTTGATGCATTTGCTGGTTGTGCTGAAAGAGGGGAAATGTGCGGTATTTATGCCATGCTATCCGACAGCCATCAGTT
TTCTCCTGAATTACAGGAGGCTGTAAGTCAACTGGCACATCAGGAGATACAGATGATTAAAGATATTATCACCTCCGGGC
AGAATAGTGGAGAGTTCAAAACAGTTCTTCTTCCGGATGAGCTCGCCGTTATAGTCTGTTCTACACTAAAGGGGGCACTG
ATGTTAAATCGACTTCCACCACATGATATCTATTCAGGAACCGTTAACGCTTTAATTAAAATGCTTGATACCCGTACTTA
A

Protein sequence :
MSTYENILRITDTLIQQRGFLGFSYADLEKEIGIRKASIHHHFPRKTDLGIAYCQYKTEVFDRLNITLHNVSSGVQRLRT
YLDAFAGCAERGEMCGIYAMLSDSHQFSPELQEAVSQLAHQEIQMIKDIITSGQNSGEFKTVLLPDELAVIVCSTLKGAL
MLNRLPPHDIYSGTVNALIKMLDTRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3600 NP_755475.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-85 99
ECUMN_3348 YP_002414024.1 putative transcriptional regulator Not tested Not named Protein 2e-85 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECABU_c32740 YP_006107273.1 transcriptional regulator VFG1721 Protein 6e-86 99