Gene Information

Name : papX (ECABU_c48440)
Accession : YP_006108754.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : HTH-type transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4944170 - 4944670 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence :
ATGAATAACACAGACACATTAGAAAAAATAATCAGACACCAAAAAAACAAAGACCCCGCATATCCCTTTCGGGAGCATTT
GTTGATGCAACTCTGTATTCGCACAAATAAAAGAATGCAGGATAATATATCTGAATTTCTGGGGGTGTATGGAATAAATC
ACTCAGTATATATGGTTCTCACCACATTATTCGCAGCGGAGAGTCATTGTCTGTCACCTTCAGAGATAAGCCAGAAACTT
CAGTTTACCAGAACTAATATTACCCGCATTACAGATTTTTTAGAAAAAGCCGGATATGTAAAAAGGATGGATAGCAGGGA
GGATCGCCGTGCTAAAAAAATCAGTCTGACATCTGAAGGTATGTTTTTTATTCAGAGGCTCACTCTTGCACAAAGCATGT
ATCTGAAAGAAATCTGGGGTTATCTGACCCATGATGAACAGGAACTGTTTGAAGTCATTAATAAAAAATTACTGGCGCAT
CTTGATGATGTCAGCTCATAA

Protein sequence :
MNNTDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVLTTLFAAESHCLSPSEISQKL
QFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAH
LDDVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfX CAD42022.1 PrfX protein Virulence PAI II 536 Protein 1e-75 100
papX NP_755457.1 PapX protein Virulence PAI I CFT073 Protein 1e-75 100
ECUMN_3330 YP_002414008.1 putative HTH-type transcriptional regulator Not tested Not named Protein 1e-75 100
prsX CAD33722.1 PrsX protein Not tested PAI I 536 Protein 2e-75 99
fooX AAT48696.1 putative regulatory protein Not tested PAI I 4787 Protein 7e-74 97
sfaX CAC43423.1 SfaX protein Virulence PAI III 536 Protein 5e-74 97
fotX AAT48705.1 FotX protein Not tested PAI II 4787 Protein 3e-74 97
APECO1_1713 YP_851471.1 hypothetical protein Not tested PAI III APEC-O1 Protein 5e-32 47
unnamed CAD66213.1 putative MarR-family transcriptional regulator Not tested PAI III 536 Protein 4e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papX YP_006108754.1 HTH-type transcriptional regulator VFG1541 Protein 5e-76 100
papX YP_006108754.1 HTH-type transcriptional regulator VFG1713 Protein 4e-76 100
papX YP_006108754.1 HTH-type transcriptional regulator VFG1463 Protein 8e-76 99
papX YP_006108754.1 HTH-type transcriptional regulator VFG1649 Protein 2e-74 97
papX YP_006108754.1 HTH-type transcriptional regulator VFG1688 Protein 2e-32 47