Gene Information

Name : hlyB (ECABU_c48850)
Accession : YP_006108794.1
Strain : Escherichia coli ABU 83972
Genome accession: NC_017631
Putative virulence/resistance : Virulence
Product : hemolysin secretion protein HlyB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4978584 - 4980707 bp
Length : 2124 bp
Strand : -
Note : -

DNA sequence :
ATGGATTCTTGTCATAAAATTGATTATGGGTTATACGCCCTGGAGATTTTAGCCCAATACCATAACGTCTCTGTTAACCC
GGAAGAAATTAAACATAGATTTGACACAGACGGGACTGGTCTGGGATTAACGTCATGGTTGCTTGCTGCGAAATCTTTAG
AACTAAAGGTAAAACAGGTAAAAAAAACAATTGACCGATTAAACTTTATTCCTTTGCCCGCATTAGTCTGGAGAGAGGAT
GGACGTCATTTTATTCTGACTAAAGTCAGTAAAGAAGCAAACAGATATCTTATTTTTGATCTGGAGCAGCGAAATCCCCG
TGTTCTCGAACAGTCTGAGTTTGAGGCGTTATATCAGGGGCATATTATTCTTATTGCTTCCCGTTCTTCTGTTACCGGGA
AACTGGCAAAATTTGACTTTACCTGGTTTATCCCTGCCATTATAAAATACAGAAAAATATTTATTGAAACCCTTGTTGTA
TCTGTTTTTTTACAATTATTTGCATTAATAACCCCCCTTTTTTTTCAGGTGGTTATGGACAAAGTATTAGTACACAGGGG
GTTTTCAACCCTTAATGTTATTACTGTCGCATTATCTGTTGTGGTGGTGTTTGAGATTATACTCAGCGGTTTAAGAACTT
ACATTTTTGCACATAGTACAAGTCGGATTGATGTTGAGTTGGGTGCCAAACTCTTCCGGCATTTACTGGCGCTACCGATC
TCTTATTTTGAGAGTCGTCGTGTTGGTGATACTGTTGCCAGGGTAAGAGAATTAGACCAGATCCGTAATTTTCTGACAGG
ACAGGCATTAACATCTGTTCTGGACTTATTATTTTCATTCATATTTTTTGCGGTAATGTGGTATTACAGCCCAAAGCTTA
CTCTGGTGATCTTATTTTCGCTGCCCTGTTATGCTGCATGGTCTGTTTTTATTAGCCCCATTTTGCGACGTCGCCTTGAT
GATAAGTTTTCACGGAATGCGGATAATCAATCTTTCCTGGTGGAATCAGTCACGGCGATTAACACTATAAAAGCTATGGC
AGTCTCACCTCAGATGACGAACATATGGGACAAACAATTGGCAGGATATGTTGCTGCAGGCTTTAAAGTGACAGTATTAG
CCACCATTGGTCAACAAGGAATACAGTTAATACAAAAGACTGTTATGATCATCAACCTGTGGTTGGGAGCACACCTGGTT
ATTTCCGGGGATTTAAGTATTGGTCAGTTAATTGCTTTTAATATGCTTGCAGGTCAGATTGTTGCACCGGTTATTCGCCT
TGCACAAATCTGGCAGGATTTCCAGCAGGTTGGTATATCAGTTACCCGCCTTGGTGATGTGCTTAACTCTCCAACTGAAA
GTTATCATGGGAAACTGGCATTACCGGAAATTAATGGTGATATCACTTTTCGTAATATCCGGTTTCGCTATAAGCCTGAC
TCTCCGGTTATTTTAGATAATATCAATCTCAGTATTAAGCAGGGGGAGGTTATTGGTATTGTCGGACGTTCTGGTTCAGG
AAAAAGCACATTAACTAAATTAATTCAACGTTTTTATATTCCTGAAAATGGCCAGGTCTTAATTGATGGACATGATCTTG
CGTTGGCCGATCCTAACTGGTTACGTCGTCAGGTGGGAGTTGTGTTGCAGGACAATGTGCTGCTTAATCGCAGTATTATT
GATAATATTTCACTGGCTAATCCTGGCATGTCCGTCGAAAAAGTTATTTATGCAGCGAAATTAGCAGGTGCTCATGATTT
TATTTCTGAATTGCGTGAGGGGTATAACACCATTGTCGGGGAACAGGGGGCAGGATTATCCGGAGGTCAACGTCAACGCA
TCGCAATTGCAAGGGCGCTGGTGAACAACCCTAAAATACTCATTTTTGATGAAGCAACCAGTGCTCTGGATTATGAGTCG
GAGCATGTCATCATGCGCAATATGCACAAAATATGTAAGGGCAGAACGGTTATAATCATTGCTCATCGTCTGTCTACAGT
AAAAAATGCAGACCGCATTATTGTCATGGAAAAAGGGAAAATTGTTGAACAGGGTAAACATAAGGAACTGCTTTCTGAAC
CAGAAAGTTTATACAGTTACTTATATCAGTTACAGTCAGACTAA

Protein sequence :
MDSCHKIDYGLYALEILAQYHNVSVNPEEIKHRFDTDGTGLGLTSWLLAAKSLELKVKQVKKTIDRLNFIPLPALVWRED
GRHFILTKVSKEANRYLIFDLEQRNPRVLEQSEFEALYQGHIILIASRSSVTGKLAKFDFTWFIPAIIKYRKIFIETLVV
SVFLQLFALITPLFFQVVMDKVLVHRGFSTLNVITVALSVVVVFEIILSGLRTYIFAHSTSRIDVELGAKLFRHLLALPI
SYFESRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILFSLPCYAAWSVFISPILRRRLD
DKFSRNADNQSFLVESVTAINTIKAMAVSPQMTNIWDKQLAGYVAAGFKVTVLATIGQQGIQLIQKTVMIINLWLGAHLV
ISGDLSIGQLIAFNMLAGQIVAPVIRLAQIWQDFQQVGISVTRLGDVLNSPTESYHGKLALPEINGDITFRNIRFRYKPD
SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSII
DNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYES
EHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 99
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 99
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyB YP_006108794.1 hemolysin secretion protein HlyB VFG0907 Protein 0.0 99
hlyB YP_006108794.1 hemolysin secretion protein HlyB VFG1557 Protein 0.0 99
hlyB YP_006108794.1 hemolysin secretion protein HlyB VFG1501 Protein 0.0 99
hlyB YP_006108794.1 hemolysin secretion protein HlyB VFG0841 Protein 0.0 73
hlyB YP_006108794.1 hemolysin secretion protein HlyB VFG1269 Protein 0.0 54