Gene Information

Name : UM146_05835 (UM146_05835)
Accession : YP_006110084.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Unknown
Product : heme lyase, CcmH subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1213118 - 1214170 bp
Length : 1053 bp
Strand : +
Note : COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes

DNA sequence :
ATGAGGTTTTTATTGGGCGTGCTGATGCTGATGATCTCCGGCTCAGCGCTGGCGACCATCGACGTGTTGCAGTTTAAAGA
TGAAGCACAGGAACAACAGTTCCGTCAGCTCACTGAAGAACTGCGCTGCCCGAAATGCCAGAACAACAGCATTGCCGATT
CCAACTCGATGATTGCCACCGACCTGCGCCAGAAAGTGTATGAACTGATGCAGGAAGGCAAAAGTAAGAAAGAGATTGTC
GATTATATGGTGGCGCGTTACGGCAACTTCGTCACTTACGATCCGCCGTTAACGCCGCTGACCGTGCTGCTGTGGGTGCT
GCCAGTAGTGGCTATTGGCATTGGCGGTTGGGTCATATACGCCCGTTCGCGGCGTCGGGTACGCGTGGTGCTGGAAGCGT
TTCCAGAACAAAGCGTGCCGGAAGGTAAGCGTGCCGGATATGTTGTTTATCTGCCGGGTATTGTGGTGGCGTTAATTGTG
GCTGGCGTCAGCTACTACCAGACTGGCAATTATCAGCAGGTGAAAATCTGGCAGCAGGCCACGGCACAGGCTCCGGCGTT
ACTGGACAGGGCGCTGGATCCGAAAGCCGATCCGCTCAACGAAGAAGAGATGTCGCGCCTTGCGCTGGGGATGCGTACTC
AACTGCAAAAAAATCCGGGAGATATAGAAGGCTGGATTATGTTGGGCCGCGTTGGCATGGCGCTGGGTAACGCCAGTATC
GCCACCGATGCATACGCCACTGCGTATCGCCTCGATCCGAAAAACAGCGATGCTGCACTGGGATACGCTGAAGCGTTGAC
ACGTTCATCTGATCCCAACGACAACCGCCTCGGCGGCGAACTGCTGCGCCAGTTGGTGAGAACGGACCATAGCAATATCC
GTGTGTTAAGCATGTATGCATTTAATGCCTTTGAGCAGCAACGATTTGGCGAAGCCGTTGCCGCGTGGGAGATGATGTTG
AAACTCTTACCTGCCAACGATACTCGCCGTGCGGTGATCGAACGTAGTATCGCGCAGGCGATGCAACATTTGTCGCCGCA
GGAGAGTAAATAA

Protein sequence :
MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIV
DYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVLEAFPEQSVPEGKRAGYVVYLPGIVVALIV
AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASI
ATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMML
KLLPANDTRRAVIERSIAQAMQHLSPQESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmH YP_217239.1 heme lyase subunit, cytochrome c-type biogenesis Not tested SPI-12 Protein 3e-108 75