Gene Information

Name : UM146_21840 (UM146_21840)
Accession : YP_006113208.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : alpha-hemolysin translocation ATP-binding protein HlyB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4564095 - 4566218 bp
Length : 2124 bp
Strand : -
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGGATTCTTGTCATAAAATTGATTATGGGTTATACGCCCTGGAGATTTTAGCCCAATACCATAACGTCTCTGTTAACCC
GGAAGAAATTAAACATAGATTTGACACAGACGGGACTGGTCTGGGATTAACGTCATGGTTGCTTGCTGCGAAATCTTTAG
AACTAAAGGTAAAACAGGTAAAAAAAACAATTGACCGATTAAACTTTATTTCTCTGCCCGCATTAGTCTGGAGAGAGGAT
GGACGTCATTTTATTCTGACTAAAGTCAGTAAAGAAGCAAACAGATATCTTATTTTTGATCTGGAGCAGCGAAATCCCCG
TGTTCTCGAACAGTCTGAGTTTGAGGCGTTATATCAGGGGCATATTATTCTTATCGCTTCCCGTTCTTCTGTTGCCGGGA
AACTGGCGAAATTTGACTTTACCTGGTTTATTCCTGCCATTATAAAATACAGGAGAATATTTATTGAAACCCTTGTTGTG
TCTGTTTTTTTACAATTATTTGCATTAATAACCCCCCTTTTTTTTCAGGTGGTTATGGACAAAGTATTAGTGCACAGGGG
ATTTTCAACTCTTAATGTTATTACTGTCGCATTATCTGTTGTGGTGGTGTTTGAGATTATACTCAGCGGTTTAAGAACTT
ACATTTTTGCACATAGTACAAGTCGGATTGATGTTGAGTTGGGTGCCAAACTCTTCCGGCATTTACTGGCGCTACCGATC
TCTTATTTTGAGAGTCGTCGTGTTGGTGATACTGTTGCCAGGGTAAGAGAATTAGACCAGATCCGTAATTTTCTGACAGG
ACAGGCATTAACATCTGTTCTGGACTTATTATTTTCATTCATATTTTTTGCGGTAATGTGGTATTACAGTCCAAAGCTTA
CTCTGGTGATCTTATTTTCGCTGCCTTGTTATGCTGCATGGTCTGTTTTTATTAGCCCCATTTTGCGACGTCGCCTTGAT
GATAAGTTTTCACGGAATGCGGATAATCAATCTTTCCTGGTGGAATCAGTCACGGCGATTAACACTATAAAAGCTATGGC
AGTCTCACCTCAGATGACGAACATATGGGACAAACAATTGGCAGGATATGTTGCTGCAGGCTTCAAAGTGACAGTATTAG
CAACCATTGGTCAACAAGGAATACAGTTAATACAAAAGACTGTTATGATCATCAACCTGTGGTTGGGAGCACACCTGGTT
ATTTCCGGGGATTTAAGTATTGGTCAGTTAATTGCTTTTAATATGCTTGCTGGTCAGATTGTTGCACCGGTTATTCGCCT
TGCACAAATCTGGCAGGATTTCCAGCAGGTTGGTATATCAGTTACCCGCCTTGGTGATGTGCTTAACTCTCCAACTGAAA
GTTATCATGGGAAACTGGCATTACCGGAAATTAATGGTGATATCACTTTTCGTAATATCCGGTTTCGCTATAAGCCTGAC
TCTCCGGTTATTTTAGATAATATCAATCTCAGTATTAAGCAGGGGGAGGTTATTGGTATTGTCGGACGTTCTGGTTCAGG
AAAAAGCACATTAACTAAATTAATTCAACGTTTTTATATTCCTGAAAATGGCCAGGTCTTAATTGATGGACATGATCTTG
CGTTGGCCGATCCTAACTGGTTACGTCGTCAGGTGGGGGTTGTGTTGCAGGACAATGTGCTGCTTAATCGCAGTATTATT
GATAATATCTCACTGGCTAATCCTGGTATGTCCGTCGAAAAAGTTATTTATGCAGCGAAATTAGCAGGCGCTCATGATTT
TATTTCTGAATTGCGTGAGGGGTATAACACCATTGTCGGGGAACAGGGGGCAGGATTATCCGGAGGTCAACGTCAACGCA
TCGCAATTGCAAGGGCGCTGGTGAACAACCCTAAAATACTTATTTTTGATGAAGCAACCAGTGCTCTGGATTATGAGTCG
GAGCATATCATCATGCGCAATATGCACAAAATATGTAAGGGCAGAACGGTTATAATCATTGCTCATCGTCTGTCTACAGT
AAAAAATGCAGACCGCATTATTGTCATGGAAAAAGGGAAAATTGTTGAACAGGGTAAACATAAGGAACTGCTTTCTGAAC
CGGAAAGTTTATACAGTTACTTATATCAGTTACAGTCAGACTAA

Protein sequence :
MDSCHKIDYGLYALEILAQYHNVSVNPEEIKHRFDTDGTGLGLTSWLLAAKSLELKVKQVKKTIDRLNFISLPALVWRED
GRHFILTKVSKEANRYLIFDLEQRNPRVLEQSEFEALYQGHIILIASRSSVAGKLAKFDFTWFIPAIIKYRRIFIETLVV
SVFLQLFALITPLFFQVVMDKVLVHRGFSTLNVITVALSVVVVFEIILSGLRTYIFAHSTSRIDVELGAKLFRHLLALPI
SYFESRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILFSLPCYAAWSVFISPILRRRLD
DKFSRNADNQSFLVESVTAINTIKAMAVSPQMTNIWDKQLAGYVAAGFKVTVLATIGQQGIQLIQKTVMIINLWLGAHLV
ISGDLSIGQLIAFNMLAGQIVAPVIRLAQIWQDFQQVGISVTRLGDVLNSPTESYHGKLALPEINGDITFRNIRFRYKPD
SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSII
DNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYES
EHIIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 99
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 99
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_21840 YP_006113208.1 alpha-hemolysin translocation ATP-binding protein HlyB VFG0907 Protein 0.0 99
UM146_21840 YP_006113208.1 alpha-hemolysin translocation ATP-binding protein HlyB VFG1557 Protein 0.0 99
UM146_21840 YP_006113208.1 alpha-hemolysin translocation ATP-binding protein HlyB VFG1501 Protein 0.0 99
UM146_21840 YP_006113208.1 alpha-hemolysin translocation ATP-binding protein HlyB VFG0841 Protein 0.0 73
UM146_21840 YP_006113208.1 alpha-hemolysin translocation ATP-binding protein HlyB VFG1269 Protein 0.0 53