Gene Information

Name : UM146_21875 (UM146_21875)
Accession : YP_006113215.1
Strain : Escherichia coli UM146
Genome accession: NC_017632
Putative virulence/resistance : Virulence
Product : integral membrane sensor signal transduction histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4573570 - 4575042 bp
Length : 1473 bp
Strand : +
Note : COG0642 Signal transduction histidine kinase

DNA sequence :
ATGAATTGTAGCCTGACATTAAGCCAGAGGTTAAGCCTAGTATTTACAGTCGTTTTGCTGTTTTGCGCAGCAGTGACATG
TGGCGTTCATATTTACAGCAGTAATCTGTATGGCAATGCAATGGTACAGCGTTTATCTGCAGGGCTGGCGCAACAGATTG
TCATCACGGAGTCTCTGCTGGATAATCGTGGGCAGGTGAATCACCGGACATTAAAGAGTCTGTTTGAGCGTCTGATGACG
CTTAATCCCAGTGTGGAGCTGTATATTGTCTCGCCGGAAGGTCGGCTGCTTGTGGAGGCCGCCCCTCCAGGTCATATCAA
ACGTCGGTATATCAATATAGCGCCCTTGAAAAAATTTCTCTCCGGTGCTGTCTGGCCCGTATATGGTGATGATCCCCGAA
GTGTAAATAAGAAAAAAGTTTTCAGTACCGCACCGCTTTACCTGAGGGATGATCTGAAAGGATATCTGTATATTATTTTA
CAGGGAGAGGAACTTAATGCTCTTACTGATGCAGCCTGGACAAAGGCACTATGGAATGCACTGTACTGGTCGCTGTTTCT
GGTAGTGATATGTGGTCTGCTGTCGGGTATGCTGGTCTGGTACTGGGTAACCCGTCCCATACAGCAACTAACTGAAAATG
TCAGCGGGATAGAGCAGGACAGTATTAGTGCCATTAAACAACTGGCAATTCAGCGCCCTGCCACCCCCCCTAGCAACGAG
GTCGAGATATTACACAATGCCTTCATTGAACTGGCCCGTAAAATATCCTGTCAGTGGGATCAACTTTCAGAAAGTGATCA
ACAGCGCCGTGAATTTATTGCCAATATCTCCCATGATTTACGGACGCCATTAACATCACTTCTGGGATATCTGGAAACCC
TGTCAATGAAGTCGGATTCGCTATCATCAGAGGACTGTCATAAATATCTGACAACAGCTCTCCGGCAGGGACACAAGGTG
AGGCATCTGTCCTGTCAGCTTTTTGAGCTGGCACGTCTTGAGCATGGTGCTATAAAACCTCAACTGGAGCAATTTTCTGT
CTGTGAACTTATTCAGGATGTAGCTCAAAAATTTGAGCTCAGCATAGAAACCCGTCGATTGCAACTAAGAATTATGATGT
CACATTCCCTGCCTCTTATCAGGGCAGATATTTCAATGATAGAGCGTGTGATAACAAATTTACTGGATAATGCTGTACGC
CACACACCTCCGGAAGGCTCGATCAGGCTGAAAGTCTGGCAGGAAGATAATCGGTTGCACGTCGAAGTGGCTGACAGCGG
CCCTGGACTAACTGAAGATATGCGAACTCATCTTTTCCGGCGGGCATCAGTGTTATGTCATGAACCGTCAGAAGAGCCCC
GGGGAGGACTGGGATTGCTGATTGTACGCAGGATGCTGGTACTACACGGTGGTGATATCAGGTTGACTGATTCAACGACT
GGAGCCTGCTTTCGTTTTTTTCTTCCATTATAA

Protein sequence :
MNCSLTLSQRLSLVFTVVLLFCAAVTCGVHIYSSNLYGNAMVQRLSAGLAQQIVITESLLDNRGQVNHRTLKSLFERLMT
LNPSVELYIVSPEGRLLVEAAPPGHIKRRYINIAPLKKFLSGAVWPVYGDDPRSVNKKKVFSTAPLYLRDDLKGYLYIIL
QGEELNALTDAAWTKALWNALYWSLFLVVICGLLSGMLVWYWVTRPIQQLTENVSGIEQDSISAIKQLAIQRPATPPSNE
VEILHNAFIELARKISCQWDQLSESDQQRREFIANISHDLRTPLTSLLGYLETLSMKSDSLSSEDCHKYLTTALRQGHKV
RHLSCQLFELARLEHGAIKPQLEQFSVCELIQDVAQKFELSIETRRLQLRIMMSHSLPLIRADISMIERVITNLLDNAVR
HTPPEGSIRLKVWQEDNRLHVEVADSGPGLTEDMRTHLFRRASVLCHEPSEEPRGGLGLLIVRRMLVLHGGDIRLTDSTT
GACFRFFLPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UM146_21875 YP_006113215.1 integral membrane sensor signal transduction histidine kinase VFG1701 Protein 0.0 99