Gene Information

Name : ETEC_3162 (ETEC_3162)
Accession : YP_006116706.1
Strain : Escherichia coli ETEC H10407
Genome accession: NC_017633
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate TonB-dependent receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3417421 - 3419745 bp
Length : 2325 bp
Strand : +
Note : -

DNA sequence :
ATGACGCCGTTACGCGTTTTTCGTAAAACAACACCTTTGGTTAACGCCATTCGCCTGAGCCTGCTGCCGCTGGCCGGTCT
CTCGTTTTCCGCTTTTGCTGCACAGGTTAATATCGCACCGGGATCGCTCGATAAAGCGCTCAATCAGTATGCCGCACACA
GCGGAATTACCCTCTCGGTTGACGCCAGCCTGACGCGCGGCAAGCAGAGCAACGGCCTGCACGGCGATTACGACGTCGAG
AGCGGCCTGCAACAACTGCTGGACGGCAGCGGACTGCAGGTAAAACCGCTGGGAAATAACAGCTGGACGCTGGAGCCCGC
GCCCGCACCAAAAGAAGATGCCCTGACCGTGGTCGGCGACTGGCTGGGTGATGCGCGTGAAAACGACGTATTTGAACATG
CTGGCGCGCGTGACGTGATCCGCCGTGAGGATTTCGCCAAAACCGGCGCAACCACCATGCGTGAGGTACTTAACCGCATC
CCTGGCGTCAGCGCGCCGGAAAACAACGGCACCGGCAGCCACGACCTGGCGATGAACTTTGGCATCCGGGGCCTGAACCC
GCGCCTCGCCAGCCGCTCGACCGTCCTGATGGACGGCATCCCCGTCCCCTTCGCCCCTTACGGTCAGCCGCAGCTTTCAC
TGGCTCCCGTTTCGCTCGGCAACATGGATGCCATTGACGTGGTACGCGGTGGTGGTGCGGTGCGTTACGGACCGCAGAGC
GTGGGCGGCGTGGTGAACTTTGTTACCCGTGCCATTCCGCAGGACTTTGGTATCGAGGCGGGCGTGGAAGGTCAGCTCAG
CCCAACCTCTTCACAAAACAACCCGAAAGAGACGCACAACCTGATGGTGGGCGGCACAGCGGACAACGGTTTTGGCACCG
CGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGC
AAATATGCGCCGGATGAGGTGCACACCTTCAACAGCCTGCTGCAATATTACGACGGTGAAGCCGACATGCCCGGTGGCCT
GTCTCGCGCGGATTACGACGCCGATCGCTGGCAATCCACCCGCTCGTATGACCGCTTCTGGGGTCGTCGCAAGCTGGCGA
GCCTGGGCTACCAGTTCCAGCCAGACAGCCAGCATAAATTCAACATTCAGGGGTTCTACACCCAAACCCTGCGCAGCGGC
TACCTGGAGCAAGGCAAACGCATCACCCTCTCGCCGCGTAACTACTGGGTGCGCGGTATTGAGCCACGCTACAGCCAGAT
CTTTATGATCGGCCCTTCCGCGCACGAAGTGGGCGTGGGCTATCGCTATGTGAATGAATCAACGCATGAAATGCGTTACT
ACACCGCCACCAGCAGCGGGCAGTTGCCGTCCGGCTCAAGCCCTTACGACCGCGATACGCGTTCCGGCACCGAGGCGCAC
GCCTGGTATCTGGATGACAAAATCGACATCGGCAACTGGACCATCACGCCGGGTATGCGTTTCGAACATATCGAGTCATA
CCAGAACAACGCCATCACAGGCACGCACGAAGAAGTGAGCTATAACGCACCGCTTCCGGCGTTGAACGTGCTCTATCACC
TGACTGACAGCTGGAATCTTTATGCAAACACTGAAGGCTCGTTCGGCACCGTACAGTACAGCCAGATTGGCAAGGCTGTG
CAAAGCGGCAATGTGGAACCGGAAAAAGCGCGAACCTGGGAACTCGGTACCCGCTACGACGACGGCGCGCTGACGGCGGA
AATGGGGCTGTTCCTGATTAACTTTAACAATCAGTACGGCTCCAACCAGACCAACGACACCGTCACTGCACGTGGCAAAA
CGCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTTTCCATCTAC
GCCAGCTATGCGTATGTGAACGCGGAAATCCGCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACA
TAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTG
CGGATAACGCCAATACGGTGAAAGAGAGCGCCGACGGCAGTACCGGCCGCATTCCCGGCTTCATGCTCTGGGGCGCACGC
GTGGCGTATGACTTTGGCCCGCAGATGGCAGATCTGAACCTGGCATTCGGTGTGAAAAACATCTTCGACCAGGACTACTT
CATCCGCTCTTATAACGACAACAACAAAGGCATCTATGCAGGCCAGCCGCGCACGCTGTATATGCAGGGGTCGTTGAAGT
TCTGA

Protein sequence :
MTPLRVFRKTTPLVNAIRLSLLPLAGLSFSAFAAQVNIAPGSLDKALNQYAAHSGITLSVDASLTRGKQSNGLHGDYDVE
SGLQQLLDGSGLQVKPLGNNSWTLEPAPAPKEDALTVVGDWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRI
PGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQS
VGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDDLMLKS
KYAPDEVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRSYDRFWGRRKLASLGYQFQPDSQHKFNIQGFYTQTLRSG
YLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYVNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTEAH
AWYLDDKIDIGNWTITPGMRFEHIESYQNNAITGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAV
QSGNVEPEKARTWELGTRYDDGALTAEMGLFLINFNNQYGSNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIY
ASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGAR
VAYDFGPQMADLNLAFGVKNIFDQDYFIRSYNDNNKGIYAGQPRTLYMQGSLKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_3162 YP_006116706.1 iron(III) dicitrate TonB-dependent receptor VFG1047 Protein 0.0 99