Gene Information

Name : NRG857_09960 (NRG857_09960)
Accession : YP_006120345.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2054805 - 2056445 bp
Length : 1641 bp
Strand : -
Note : COG0534 Na+-driven multidrug efflux pump

DNA sequence :
TTGAGGCACATCTTAACGGCGAAAAATATTTTGTCAAACCCGATTTTTAAATTTCCCAACTGTTTGCCGTTTCTATCAAC
AGTTTGTTGCATTTGCAGACAATTTGTTGGCGAAAATCTTTGCAGCTTTGCTGATTCTCCCTCATCATTTGAAATGTGGT
TTCACTTTCTGCAATTAAGGTCGGCTTTGAATATCTCCTCTGCTTTACGCCAGGTTGTTCACGGCACTCGCTGGCACTCT
AAACGCAAGAGCTACAAAGTGTTGTTCTGGCGCGAGATAACCCCGCTTGCTGTTCCTATCTTCATGGAGAACGCCTGTGT
CCTGTTGATGGGGGTCCTGAGCACTTTTCTGGTCAGCTGGCTGGGAAAAGATGCGATGGCCGGCGTGGGGTTGGCGGACA
GCTTCAATATGGTCATTATGGCTTTTTTTGCAGCTATCGATCTTGGTACTACTGTCGTTGTAGCATTTAGTCTCGGTAAG
CGAGATCGACGACGAGCGAGGGTGGCGACGCGGCAGTCATTGGTGATCATGACGTTGTTTGCCGTACTGTTGGCAACGCT
AATTCATCATTTTGGCGAACAAATTATTGATTTCGTCGCGGGTGATGCCACGACAGACGTTAAAGCACTGGCGTTGACTT
ATCTGGAGCTGACCGTACTCAGTTATCCAGCAGCTGCCATCACTCTTATTGGTAGCGGGGCACTTCGTGGTGCAGGGAAT
ACGAAAATACCGCTACTGATTAACGGTAGCCTGAATATTCTTAATATTATTATTAGCGGCATATTGATTTACGGCCTTTT
CTCCTGGCCGGGACTGGGATTTGTCGGGGCTGGGTTGGGTTTAACCATTTCTCGTTATATTGGCGCAGTTGCAATTTTGT
GGGTGCTGGCGATTGGTTTTAATCCTGCGCTAAGGATTTCATTAAAGAGCTATTTTAAACCGCTGAATTTTAGCATTATC
TGGGAAGTCATGGGGATTGGTATTCCAGCGAGTGTCGAATCAGTGCTATTTACCAGTGGTCGGTTATTAACCCAAATGTT
CGTTGCCGGGATGGGGACCAGCGTTATTGCCGGAAATTTTATCGCGTTTTCAATTGCGGCTCTTATCAACTTACCCGGAA
GTGCGCTCGGCTCTGCTTCTACGATCATTACAGGCCGAAGGTTGGGGGTAGGGCAGATAGCGCAAGCAGAGATTCAGTTG
CGGCATGTGTTCTGGCTGTCCACTCTTGGATTAACGGCCATCGCCTGGCTAACGGCTCCCTTTGCCGGGGTTATGGCATC
GTTTTACACCCAGGATCCACAGGTTAAACACGTCGTTGTGATTCTGATTTGGCTAAATGCTTTATTTATGCCTATTTGGT
CCGCCTCATGGGTGCTACCCGCTGGATTTAAGGGGGCTCGTGATGCCCGTTACGCCATGTGGGTTTCTATGTTGAGCATG
TGGGGTTGCCGGGTTGTAGTCGGTTATGTGCTGGGAATCATGCTTGGCTGGGGTGTGGTTGGTGTCTGGATGGGAATGTT
TGCCGACTGGGCTGTGCGGGCCGTGCTGTTTTACTGGCGAATGGTTACTGGACGTTGGCTATGGAAATACCCTCGATCCG
AGCCGCAAAAGTGTGAAAAAAAGCCAGTTGTGTCGGAATAA

Protein sequence :
MRHILTAKNILSNPIFKFPNCLPFLSTVCCICRQFVGENLCSFADSPSSFEMWFHFLQLRSALNISSALRQVVHGTRWHS
KRKSYKVLFWREITPLAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLGK
RDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTDVKALALTYLELTVLSYPAAAITLIGSGALRGAGN
TKIPLLINGSLNILNIIISGILIYGLFSWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSII
WEVMGIGIPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQIAQAEIQL
RHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALFMPIWSASWVLPAGFKGARDARYAMWVSMLSM
WGCRVVVGYVLGIMLGWGVVGVWMGMFADWAVRAVLFYWRMVTGRWLWKYPRSEPQKCEKKPVVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeO YP_853088.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-179 95

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_09960 YP_006120345.1 hypothetical protein BAC0146 Protein 7e-155 81