Gene Information

Name : NRG857_12260 (NRG857_12260)
Accession : YP_006120802.1
Strain : Escherichia coli NRG 857C
Genome accession: NC_017634
Putative virulence/resistance : Virulence
Product : putative carboxysome structural protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2565609 - 2565902 bp
Length : 294 bp
Strand : -
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGGAAGCATTAGGAATGATCGAAACCCGGGGCCTGGTTGCACTGATTGAGGCTTCTGACGCGATGGTTAAAGCTGCGCG
CGTCAAGCTGGTTGGTGTTAAGCAGATTGGCGGCGGCCTGTGTACTGCCATGGTTCGTGGTGATGTTGCAGCCTGTAAAG
CCGCGACCGATGCAGGTGCCGCAGCGGCACAGCGTATCGGCGAGCTGGTATCTGTACACGTTATCCCGCGTCCGCACGGC
GACCTGGAAGAAGTCTTCCCGATCGGCCTGAAAGGCGATAGCAGCAACCTGTAA

Protein sequence : 
MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHG
DLEEVFPIGLKGDSSNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-14 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_12260 YP_006120802.1 putative carboxysome structural protein VFG1596 Protein 9e-15 62
NRG857_12260 YP_006120802.1 putative carboxysome structural protein VFG1597 Protein 2e-14 61
NRG857_12260 YP_006120802.1 putative carboxysome structural protein VFG1598 Protein 7e-13 56