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Name : secD (NRG857_01915) Accession : YP_006118746.1 Strain : Escherichia coli NRG 857C Genome accession: NC_017634 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 427044 - 428858 bp Length : 1815 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCAC TGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTA AGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGCTGCGCGCTCGTGAAGCATTA ATGGGCGTTATGGGTGACAAATACGTCGTGGCGCTTAACCTTGCCCCGGCAACGCCGCGCTGGCTGGCAGCTATTCATGC TGAGCCGATGAAGCTCGGCCTTGACCTGCGTGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGACACCGCGCTTGGCA AACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGACCTGCGTGAAAAGGGCATCCCGTATACCACCGTTCGTAAAGAA AACAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCC GGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAAT ATGCGGTGCAGCAGAACATCAATATCCTGCGTAACCGTGTAAACCAACTTGGCGTGGCGGAGCCGGTGGTTCAGCGTCAG GGTGCTGACCGTATCGTTGTTGAACTGCCAGGTATTCAGGACACTGCGCGTGCGAAAGAGATTCTGGGTGCGACGGCAAC GCTGGAATTCCGTCTGGTAAACACCAACGTTGATCAGGCCGCTGCGGCATCCGGTCGCGTACCGGGCGACTCTGAAGTGA AACAGACCCGCGAAGGTCAGCCGGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCC AGCCAGGACGAATACAACCAGCCGCAGGTTAACATCTCGCTCGATAGCGCGGGTGGTAACATCATGTCTAACTTCACCAA GGACAACATCGGCAAACCGATGGCAACTCTGTTTGTGGAGTACAAAGACAGCGGTAAGAAAGATGCAAACGGTCGTGCGG TTCTGGTGAAACAGGAAGAGGTGATTAACATCGCCAACATCCAGTCTCGTCTGGGTAACAGCTTCCGTATTACTGGCATC AATAACCCAAGCGAAGCGCGTCAGCTTTCACTGCTGCTGCGTGCCGGTGCGTTGATCGCGCCGATTCAGATTGTTGAAGA ACGTACCATTGGCCCAACCCTGGGTATGCAGAACATTGAGCAGGGGCTGGAGGCTTGCCTTGCCGGTCTGCTGGTTTCTA TTCTGTTCATGATCATCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTGATTGTC GGTATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTAGCGGT CGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGCAACGGACGTACTGTTCAACAGGCAATTGATGAAG GTTATCGTGGCGCATTCAGTTCCATCTTCGATGCGAACATCACCACGCTGATTAAAGTCATCATCCTGTATGCAGTGGGT ACCGGGGCAATTAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCG TGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGA Protein sequence : MLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREAL MGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKE NNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTS SQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGI NNPSEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVIILYAVG TGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-119 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 48 |
