Gene Information

Name : cobT (ECW_m2163)
Accession : YP_006124848.1
Strain : Escherichia coli W
Genome accession: NC_017635
Putative virulence/resistance : Unknown
Product : Nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2214804 - 2215883 bp
Length : 1080 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAACACTTGCCGATTTACTGAATACGATCCCTGCTATCGATCCTGCCGCTATGTCGCGTGCACAACGGCATATTGA
CGGGTTACTCAAACCTGTTGGTAGCCTGGGAAGGCTGGAGGCGCTTGCCATACAACTGGCGGGAATGCCGGGGTTGAATG
GCATACCGCATGTGGGCAAAAAAGCGGTACTGGTTATGTGTGCCGATCACGGCGTCTGGGAGGAAGGGGTCGCTATTTCC
CCAAAAGAAGTGACAGCCATTCAGGCTGAAAATATGACCCGCGGAACAACCGGCGTGTGTGTGCTGGCAGCACAAGCGGG
CGCTAACGTCTACGTAATTGATGTTGGTATTGATACTGCTGAGCCTATCCCCGGGCTTATCAACATGCGTGTTGCTCGAG
GTAGTGGCAATATTGCTTCAGCTCCGGCAATGAGTCGCCATCAGGCAGAAAAGTTGCTTTTGGACGTCATATGTTATACG
CGGGAGCTGGCAAAAAACGGTGTTACGCTGTTTGGTGTAGGTGAACTGGGGATGGCAAACACGACACCGGCAGCGGCAAT
AGTCAGCACAATCACTGGCCGGGCTCCTGAAGAAGTGGTTGGGATTGGCGCAAACCTGCCGACAGATAAACTGGCTAATA
AAATTGATGTTGTGCGCCGGGCGATTACGTTGAATCAACCAAATCCGCAGGATGGCGTTGATGTCCTGGCAAAAGTGGGT
GGATTTGATTTGGTCGGAATGGCTGGCGTGATGTTAGGCGCTGCTTCCTGCGGTTTACCCGTGTTGCTGGATGGATTTCT
TTCTTATGCTGCCGCGCTCGCAGCCTGCCAGATGTCTCCTGCAATCAAACCGTATCTCATTCCTTCTCACCTGTCGGCAG
AAAAAGGGGCGCGTATAGCGCTGTCGCATTTGGGGCTGGAGCCTTATCTCAATATGGAGATGCGTTTAGGTGAGGGGAGT
GGCGCAGCTCTGGCGATGCCCATCATCGAAGCTGCCTGTGCGATATACAACAACATGGGCGAACTTGCTGCCAGTAATAT
TGTTCTACCGGGGAATACGACTTCTGATTTGAACAGTTAA

Protein sequence : 
MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAIQLAGMPGLNGIPHVGKKAVLVMCADHGVWEEGVAIS
PKEVTAIQAENMTRGTTGVCVLAAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHQAEKLLLDVICYT
RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVG
GFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGS
GAALAMPIIEAACAIYNNMGELAASNIVLPGNTTSDLNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cobT YP_853092.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Not tested PAI IV APEC-O1 Protein 3e-163 98