Gene Information

Name : ECW_m3034 (ECW_m3034)
Accession : YP_006125670.1
Strain : Escherichia coli W
Genome accession: NC_017635
Putative virulence/resistance : Virulence
Product : ClpA/ClpB family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3107913 - 3110558 bp
Length : 2646 bp
Strand : +
Note : -

DNA sequence :
ATGACCGGAAATCACCCCGCCGCGCTGCTGCGTCGCCTTAACCCGTACTGTGCACGGGCGCTGGACGCTGCCGCCTCACT
GTGTCAGACCCGCGCCCATGCGGAGATAACCATTGAACACTGGCTGCTGAAACTGCTGGAGCAGGGAGAAGGCGATATCA
CGGTGATTGCCCGCCGCTATGAATGGGATATCGACACGCTCTGGCAGTCTCTGCTGGCACATCTGGACACCTTACCCCGC
TCGGTCCGCGAACGTCCGCAGCTTTCTGAACCCCTGACGGCGCTTATCAGGCAGGCGTGGCTGATTGCCTCGCTGGAAGG
CGACGACCCGCAAATCCGCAGTCAGCACCTGCTGATGGCGCTGACAGAAAAACCGATGCTGCCCGCCTGTAATGACCTGT
GGGTATTGCTGAGCCTGAGCCGTGTGCAGCTTGAGCGGCTGCGTCCCCTGCTGGATGCGCAGTCGGATGAATGTCCGGCA
CGTCAGCCACAGGTCACCGAACCGCTGACATCCGCGCAACCAGAGGCGGCAACGACGGACGCACCGGCAAAAACGCTGAC
GGGGAAACAGGATGACGCCCTGCTGGCGGTGCTTAACCGCTTTACCGAAGACGTGACGGAAAAAGCCCGCAGCGGGCGAA
TCGACCCGGTATTCGGGCGCGACACGGAAATTCGCCAGATGGTCGATATCCTCTCACGTCGCCGCAAAAACAACCCGATT
CTGGTGGGAGAACCGGGGGTGGGCAAAACCGCGCTGGTGGAAGGGCTGGCGCTGCGTATCGCCGAAGGCAACGTGCCGGA
CAGCCTGAAAACGGTGCATATCCGCACACTGGACCTCGGTCTGTTACAGGCTGGCGCGGGTGTTAAAGGTGAATTTGAAC
AGCGGCTGAAAAATGTCATCGATGCAGTGCAGAAATCACCGGAGCCGGTACTGCTGTTTATTGATGAAGCCCATACCATT
ATCGGTGCGGGTAATCAGGCAGGCGGCGCGGATGCGGCGAACCTGCTGAAACCGGCGCTGGCAAGGGGCGAACTGCGCAC
CATCGCCGCCACAACGTGGAGCGAATACAAACAGTATTTTGAGCGCGACGCCGCGCTGGAACGCCGCTTCCAGATGGTGA
AAGTCGACGAGCCGGATGATGACACCGCCTGCCTGATGCTGCGGGGACTCAAGGCCCGCTATGCACAGCACCACGGCGTA
CATATGCTGGACAGCGCCATTCAGACCGCCGTGCGCCTGTCGCGCCGCTATCTGACCGGACGCCAGTTGCCGGACAAGGC
GGTTGATTTGCTGGATACCGCCGGGGCAAGAGTCCGCATGAGCCTCGACACCCTGCCGGAACCGTTGACGCAGCTTCAGG
CGCGTCTGACCGCGCTGGATATTGAGCGGGAAGCAATTGAGCAGGACAGCGTGTTTTATCCCGAAGCCAGCCCGGAGCGG
CTGGCGGAACTGACCGATTTGCGTGATGAGCTGCAGGCAGAAGCCGGGCATCTGGAAGCGCAGTATCAGCAGGAAAAGGC
ACTGGCGCAGCAGATTATGACGTTGCGTCAGGAAGGGACAGACAGCACTGAACTGCAACAGCAACTGCGAGCGCATCAGG
GCTTTGCTCCGTTGCTGGCGCTGGATGTGGACGCCCGCGCCGTCGCCACGGTGGTGGCGGACTGGACCGGCATCCCGCTC
TCTTCGCTGCTCAAGGACGAGCAGAGCGACCTGCTCAGTATGGAACAAAGCCTTGAAAACCGCGTTGTCGGGCAAAGCCC
GGCGCTCTGCGCCATCGCACAGCGGCTGCGGGCGGCTAAAACCGGCCTCACGCCGGAGAATGGCCCGCAGGGGGTATTCC
TGCTGACCGGCCCCAGCGGCACCGTTAAAACCGAAACTGCGCTCACACTGGCCGACACCCTGTTTGGCGGTGAAAAATCC
CTTATCACCATCAACCTCTCCGAATATCAGGAGCCGCATACCGTCTCCCAGCTTAAGGGGTCTCCTCCGGGCTACGTTGG
CTACGGTCAGGGCGGCGTACTTACCGAAGCCGTTCGCAAACGCCCGTACAGCGTGGTGCTGCTCGACGAAGTGGAAAAGG
CGCACCGCGACGTAATGAACCTGTTCTATCAGGTGTTTGACCGGGGTTTTATGCGCGACGGCGAAGGGCGGGAAATTGAC
TTCCGCAACACCGTGATTCTGATGACGGCTAATCTGGGCAGCGACCACATCATGCAGCTGCTGGAGGAAAAACCGGACGC
CACAGACGCAGACCTGCATGAACTGCTGTATCCCCTGCTGCGCGAGCACTTCCAGCCTGCACTGATGGCGCGTTTTCAGA
CGGTGATTTACCGCCCGCTGGGACAGGAAGCGATGCGCGCCATTGTGGAAATGAAACTGGCGCAGGTGGTTCGTCGTCTT
CGTCAGCACTATGGGCTGGAAACGGAAATCAACGACAGCCTGTACGACGCCCTGACCGCCGCCTGCCTGCTGCCGGACAC
CGGTGCGCGTAATATCGACAGCCTGCTGAACCAGCAAATCCTGCCGGTCTTAAGCCAGCAGTTGCTGGCACAGCAGGCTG
CGCACCATAAGCCAGCCCAACTACGGCTTGGCTGGGATGAGGAAGACGGGATTGTACTGGAGTTCGCTACGGAAGAGATG
CAATAA

Protein sequence :
MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSLLAHLDTLPR
SVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMALTEKPMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPA
RQPQVTEPLTSAQPEAATTDAPAKTLTGKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI
LVGEPGVGKTALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEAHTI
IGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGV
HMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLQARLTALDIEREAIEQDSVFYPEASPER
LAELTDLRDELQAEAGHLEAQYQQEKALAQQIMTLRQEGTDSTELQQQLRAHQGFAPLLALDVDARAVATVVADWTGIPL
SSLLKDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTVKTETALTLADTLFGGEKS
LITINLSEYQEPHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREID
FRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLREHFQPALMARFQTVIYRPLGQEAMRAIVEMKLAQVVRRL
RQHYGLETEINDSLYDALTAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAAHHKPAQLRLGWDEEDGIVLEFATEEM
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-141 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECW_m3034 YP_006125670.1 ClpA/ClpB family protein VFG2084 Protein 7e-131 44
ECW_m3034 YP_006125670.1 ClpA/ClpB family protein VFG2076 Protein 1e-148 44
ECW_m3034 YP_006125670.1 ClpA/ClpB family protein VFG0079 Protein 1e-99 41