Gene Information

Name : hlyA (UMNK88_pHly50)
Accession : YP_006137085.1
Strain :
Genome accession: NC_017643
Putative virulence/resistance : Virulence
Product : hemolysin structural protein HlyA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 51013 - 54087 bp
Length : 3075 bp
Strand : +
Note : -

DNA sequence :
ATGCCAACAATAACCACTGCACAAATTAAAAGCACACTGCAGTCTGCAAAGCAATCCGCTGCAAATAAATTGCACTCAGC
AGGACAAAGCACGAAAGATGCATTAAAAAAAGCAGCAGAGCAAACCCGCAATGCGGGAAACAGACTCATTTTACTTATCC
CTAAAGATTATAAAGGACAGGGTTCAAGCCTTAATGACCTTGTCAGGACGGCAGATGAACTGGGAATTGAAGTCCAGTAT
GATGAAAAGAATGGCACGGCGATTACTAAACAGGTGTTCGGCACAGCAGAGAAACTCATTGGCCTCACCGAACGGGGAGT
GACTATCTTTGCACCACAATTAGACAAATTACTGCAAAAGTATCAAAAAGCAGGTAATAAATTAGGTGGCAGTGCTGAAA
ATATCGGTGATAACTTAGGAAAGGCAGGCGGTATATTGTCAACGTTTCAAAATTTCCTGGGTACTGCACTTTCCTCAATG
AAAATAGACGAACTGATAAATAAACAAAAATCTGGTGGCAATGTCAGTTCTTCTGAGATGGCAGAAGCGAGTATTGAGCT
AATCAATCAACTTGTGGATACAGCTGCCAGCCTTAATAATAATGTTAACTCATTTTCTCAACAACTCAATACTCTGGGAA
GTGTATTATCCAATACAAAGCACCTGAACGGTGTTGGTAATAAGTTACAGAATTTACCTAATCTTGATAATATCGGTGCA
GGGTTAGATACTGTATCGGGTATTTTATCTGCGATTTCAGCAAGCTTCATTCTGAGCAATGCAGATGCAGATACCAGAAC
TAAAGCTGCAGCAGGTGTTGAATTAACAACGAAAGTACTGGGTAATGTTGGAAAAGGTATTTCTCAATATATTATCGCAC
AGCGCGCTGCACAGGGGTTATCTACATCTGCTGCTGCTGCCGGTTTAATTGCTTCTGCTGTGACACTAGCAATTAGTCCC
CTCTCATTCCTGTCCATTGCCGATAAGTTTAAACGTGCCAATAAAATAGAGGAGTATTCACAACGATTCAAAAAACTTGG
ATACGATGGTGACAGTTTACTTGCTGCTTTCCACAAAGAAACAGGGGCTATTGATGCATCATTAACAACGATAAGCACTG
TACTGGCTTCAGTATCTTCAGGTATTAGTGCTGCTGCAACGACATCTCTGGTTGGTGCACCGGTAAGCGCGCTGGTAGGC
GCTGTTACGGGGATAATTTCAGGTATCCTTGAGGCTTCAAAGCAGGCAATGTTTGAACATGTTGCCAGTAAAATGGCTGA
TGTTATTGCTGAATGGGAGAAAAAACACGGCAAAAATTACTTTGAAAATGGATATGATGCCCGCCATGCTGCATTTTTAG
AAGATAACTTTAAAATATTATCTCAGTATAATAAAGAGTATTCTGTTGAAAGATCAGTCCTCATTACCCAGCAACATTGG
GATACGCTGATAGGTGAGTTAGCTGGTGTCACCAGAAATGGAGACAAAACACTCAGTGGTAAAAGTTATATTGACTATTA
TGAAGAAGGAAAACGTCTGGAGAAAAAACCGGATGAATTCCAGAAGCAAGTCTTTGACCCATTGAAAGGAAATATTGACC
TTTCTGACAGCAAATCTTCTACGTTATTGAAATTTGTTACGCCATTATTAACTCCCGGTGAGGAAATTCGTGAAAGGAGG
CAGTCCGGAAAATATGAATATATTACCGAGTTATTAGTCAAGGGTGTTGATAAATGGACGGTGAAGGGGGTTCAGGACAA
GGGGGCTGTATATGATTACTCTAACCTGATTCAGCATGCATCAGTCGGTAATAACCAGTATCGGGAAATCCGTATTGAGT
CACACCTGGGAGACGGGGATGATAAGGTCTTTTTATCTGCCGGCTCAGCCAATATCTACGCAGGTAAAGGACATGATGTT
GTTTATTATGATAAAACAGACACTGGTTATCTGACCATTGATGGCACAAAAGCAACCGAAGCGGGTAATTACACGGTAAC
ACGTGTACTTGGTGGCGATGTTAAGGTTTTACAGGAAGTTGTGAAGGAGCAGGAGGTTTCAGTCGGAAAAAGAACTGAAA
AAACGCAATATCGGAGTTATGAATTCACTCATATCAATGGTAAAAATTTAACAGAGACTGATAACTTATATTCCGTGGAA
GAACTTATTGGGACCACGCGTGCCGACAAGTTTTTTGGCAGTAAATTTACTGATATCTTCCATGGCGCGGATGGTGATGA
CCTTATAGAAGGAAATGATGGGAATGACCGCTTATATGGTGATAAAGGTAATGACACACTGAGTGGTGGAAACGGAGATG
ACCAGCTCTATGGCGGTGATGGTAACGATAAGTTGATTGGGGGAGCAGGTAATAATTACCTGAACGGCGGAGATGGAGAT
GATGAGCTTCAGGTTCAGGGAAATTCTCTTGCAAAAAATGTATTATTCGGTGGAAAAGGTAATGACAAGCTGTACGGCAG
TGAGGGGGCAGATCTGCTTGATGGTGGAGAGGGGAATGATCTCCTGAAAGGCGGATATGGTAATGATATTTATCGTTATC
TGTCAGGATATGGTCATCATATTATTGATGATGATGGGGGGAAAGAGGATAAACTCAGTTTGGCTGATATTGATTTCCGG
GATGTGGCCTTCAAGCGAGAAGGTAATGACCTCATCATGTATAAAGCTGAAGGTAATGTTCTTTCCATTGGTCATGAAAA
TGGTATTACATTCAGGAACTGGTTTGAAAAAGAGTCAGGTGATATCTCTAATCACCAGATAGAGCAGATTTTTGATAAAG
GTGGCCGGATAATCACACCTGATTCCCTTAAAAAGGCACTTGAGTATCAACAGCGTAATAATAAGGCAAGTTATGTGTAT
GGGAATGATGCATTAGCCTATGGAAGTCAGGATGATCTTAATCCATTAATTAATGAAATCAGCAAAATCATTTCAGCTGC
AGGTAACTTCGATGTTAAAGAGGAAAGAACTGCAGCTTCTTTATTGCAGTTGTCCGGTAATGCCAGTGATTTTTCATATG
GACGGAACTCAATAACCCTGACCACATCAGCATAA

Protein sequence :
MPTITTAQIKSTLQSAKQSAANKLHSAGQSTKDALKKAAEQTRNAGNRLILLIPKDYKGQGSSLNDLVRTADELGIEVQY
DEKNGTAITKQVFGTAEKLIGLTERGVTIFAPQLDKLLQKYQKAGNKLGGSAENIGDNLGKAGGILSTFQNFLGTALSSM
KIDELINKQKSGGNVSSSEMAEASIELINQLVDTAASLNNNVNSFSQQLNTLGSVLSNTKHLNGVGNKLQNLPNLDNIGA
GLDTVSGILSAISASFILSNADADTRTKAAAGVELTTKVLGNVGKGISQYIIAQRAAQGLSTSAAAAGLIASAVTLAISP
LSFLSIADKFKRANKIEEYSQRFKKLGYDGDSLLAAFHKETGAIDASLTTISTVLASVSSGISAAATTSLVGAPVSALVG
AVTGIISGILEASKQAMFEHVASKMADVIAEWEKKHGKNYFENGYDARHAAFLEDNFKILSQYNKEYSVERSVLITQQHW
DTLIGELAGVTRNGDKTLSGKSYIDYYEEGKRLEKKPDEFQKQVFDPLKGNIDLSDSKSSTLLKFVTPLLTPGEEIRERR
QSGKYEYITELLVKGVDKWTVKGVQDKGAVYDYSNLIQHASVGNNQYREIRIESHLGDGDDKVFLSAGSANIYAGKGHDV
VYYDKTDTGYLTIDGTKATEAGNYTVTRVLGGDVKVLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVE
ELIGTTRADKFFGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDGD
DELQVQGNSLAKNVLFGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGKEDKLSLADIDFR
DVAFKREGNDLIMYKAEGNVLSIGHENGITFRNWFEKESGDISNHQIEQIFDKGGRIITPDSLKKALEYQQRNNKASYVY
GNDALAYGSQDDLNPLINEISKIISAAGNFDVKEERTAASLLQLSGNASDFSYGRNSITLTTSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyA NP_755445.1 hemolysin A Virulence PAI I CFT073 Protein 0.0 98
hlyA CAD33759.1 hemolysin A Virulence PAI I 536 Protein 0.0 97
hlyA CAD42039.1 HlyA protein Virulence PAI II 536 Protein 0.0 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyA YP_006137085.1 hemolysin structural protein HlyA VFG0906 Protein 0.0 98
hlyA YP_006137085.1 hemolysin structural protein HlyA VFG1500 Protein 0.0 97
hlyA YP_006137085.1 hemolysin structural protein HlyA VFG1558 Protein 0.0 96
hlyA YP_006137085.1 hemolysin structural protein HlyA VFG0840 Protein 0.0 62