Gene Information

Name : ECO55CA74_14745 (ECO55CA74_14745)
Accession : YP_006160076.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : carboxysome structural protein EutM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3039661 - 3039954 bp
Length : 294 bp
Strand : -
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGGAAGCATTAGGAATGATCGAAACCCGGGGCCTGGTTGCACTGATTGAGGCTTCTGACGCGATGGTGAAAGCTGCGCG
CGTCAAGCTGGTTGGTGTTAAGCAGATTGGCGGCGGCCTGTGTACTGCCATGGTTCGTGGTGATGTTGCAGCCTGTAAAG
CGGCGACCGATGCCGGTGCCGCAGCGGCACAGCGTATCGGCGAGCTGGTATCTGTACACGTTATCCCGCGTCCGCACGGC
GACCTGGAAGAAGTGTTCCCGATCGGCCTGAAAGGCGATAGCAGCAACCTGTAA

Protein sequence : 
MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHG
DLEEVFPIGLKGDSSNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-14 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_14745 YP_006160076.1 carboxysome structural protein EutM VFG1596 Protein 9e-15 62
ECO55CA74_14745 YP_006160076.1 carboxysome structural protein EutM VFG1597 Protein 2e-14 61
ECO55CA74_14745 YP_006160076.1 carboxysome structural protein EutM VFG1598 Protein 7e-13 56