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Name : ECO55CA74_20235 (ECO55CA74_20235) Accession : YP_006161154.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 4180422 - 4181711 bp Length : 1290 bp Strand : + Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases DNA sequence : ATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATTGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAG TGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTAGTACATCCGGGCGATATTCCGGTGGTGTGGAATATCGTCT GGAACGCGACGGCTGCGTTTATTGCCGTTATTATCATCAGCCTGCTGCTGGATGAGTCCGGCTTTTTTGAATGGGCGGCA CTGCACGTTGCACGCTGGGGCAATGGACGCGGTCGCTTGCTGTTTACCTGGATTGTCCTGCTCGGTGCTGCCGTTGCCGC CCTGTTTGCCAATGATGGCGCGGCGCTTATTTTGACACCGATTGTCATCGCCATGCTGCTGGCTTTAGGGTTCAGTAAAG GCACTACGCTGGCGTTTGTGATGGCGGCCGGATTCATTGCCGATACCGCCAGCCTGCCGCTTATTGTCTCCAACCTGGTG AATATCGTTTCCGCAGATTTCTTTGGCCTCGGCTTTCGCGAATATGCCTCGGTGATGGTGCCGGTGGATATCGCCGCGAT TGTTGCCACGCTGGTGATGTTGCATCTCTATTTCCGCAAAGATATTCCGCAGAACTACGACATGGCGCTGCTGAAATCTC CCGCAGAAGCGATTAAAGATCCTGCTACGTTCAAAACTGGCTGGGTTGTTTTACTGCTTCTGCTGGTGGGATTTTTCGTC CTGGAACCGCTCGGCATTCCGGTCAGCGCCATTGCGGCAGTGGGCGCGTTGATATTATTTGTCGTCGCTAAACGCGGTCA TGCGATTAATACGGGTAAAGTGCTGCGCGGTGCGCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTT ATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCG ACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTC CATTGATGGCAGCACGGCATCTGGCGTTATCAAAGAAGCGATGGTTTATGCCAACGTGATTGGCTGCGATTTGGGGCCGA AAATCACCCCGATTGGTAGCCTGGCAACGCTGCTCTGGCTGCACGTACTTTCGCAGAAGAATATGACTATCAGCTGGGGA TATTACTTCCGTACAGGGATTATCATGACCCTGCCTGTGCTGTTTGTGACGCTGGCTGCGCTGGCGCTACGTCTCTCTTT CACTTTGTAA Protein sequence : MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAA LHVARWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAA TLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWG YYFRTGIIMTLPVLFVTLAALALRLSFTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 8e-157 | 92 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-95 | 59 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 3e-95 | 59 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-99 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_20235 | YP_006161154.1 | arsenical pump membrane protein | BAC0578 | Protein | 3e-161 | 94 |
| ECO55CA74_20235 | YP_006161154.1 | arsenical pump membrane protein | BAC0576 | Protein | 3e-160 | 94 |
| ECO55CA74_20235 | YP_006161154.1 | arsenical pump membrane protein | BAC0031 | Protein | 2e-156 | 91 |
| ECO55CA74_20235 | YP_006161154.1 | arsenical pump membrane protein | BAC0577 | Protein | 6e-155 | 90 |
| ECO55CA74_20235 | YP_006161154.1 | arsenical pump membrane protein | BAC0575 | Protein | 3e-100 | 60 |
| ECO55CA74_20235 | YP_006161154.1 | arsenical pump membrane protein | BAC0574 | Protein | 7e-97 | 60 |
