Gene Information

Name : SMD_1265 (SMD_1265)
Accession : YP_006184006.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1406265 - 1408514 bp
Length : 2250 bp
Strand : +
Note : -

DNA sequence :
ATGTCTCCTGCCGTTGTCCTTTCGCCGCGCCCGCTGGCGCTCGCCGTTGCCGCCCTGCTGGCGGGAAGCGCCCTGACCGC
CCGGGCTGAAACCGACGCCACCGATATCGACACGGTGCATGTCACCGCCTCGCAGATTGCCCGCCAGGCACTGGGTACCT
CGACCATCACCGCCGAGGACATCGCCAAGCGCCCGCCGGCCAACGACATCGCCGAACTGCTGCGCACCATGCCGGGCGTC
AACCTCACCGGCAACAGCGCCTCGGGCCAGTACGGCAACAACCGCCAGATCGACCTGCGTGGCATGGGCCCGGAAAACAC
CCTGATCCTGGTCGACGGCAAGCGCATCGGTGCGCGTGATGCCGTGCGCATGGGCCGTAGCGGTGAGCGCAATACCCGCG
GTGATACCAACTGGGTGCCGGCGGAAATGATCGAGCGCATCGAAGTGCTGCGCGGCCCTGCGGCGGCACGCTATGGCTCC
GGTGCGTCCGGTGGCGTGGTCAACATCATCACCAAGCGCCCGACCGGCGACCTGACCGGAGCGGTCGACCTGTATGGCCT
GGTGCCCGAGCACAGCGCCGAAGGCGGCAGCGAGCGCGTCGGCCTGCAGCTGAGCGGGCCGATGACCGACACCCTGTCGT
TCCGCCTGTACGGCAACCTCAACAAGACCGACGCCGACTCACTGGACCTCAACCGCCAGTACGCCACCAACCCGAACGCG
GTGCCGCCGGCTGGCCGCGAGGGTGTCAAGAACCGCGACGTCAACGCGTTGCTGCGCTGGGACATCACCGCCGACCAGGT
GGTGGAGTTCGAAGCCGGCACCAGCCGCCAGGGCAACATCTACGCCGGTGACCGCGCGGTCAGCACTACCGGTACCTCGA
CCGGCGTTGACTTGGCAGCGCTGGCCGACGGCGAAGCGGAAACCAACCGCATGTACCGCAACACCGGCGCGATCACCCAT
CGCGGCCGCTGGGGCGACGTGACCTCGCGGGTGACCGCCGCGGTGGAAGCGGTCAACAACTCGCGCATCAATGAAGGCCT
GGCCGGTGGCCCGGAAGGCAGCTTCAACGGCACCGACTGGTCGACCTCGCGCCTGCGCAACTACCAGCTGGATGGCGAAG
TGAGCTTCCCGACCTCGCTGGGCAGCGTCGAGAACATCTGGACGCTGGGCTTTGAATACCTGGACAGCCGCCTGACCGAC
CCGTACTCGATGAGCCAGTCCAGCAGCAGCGGCGGCGGCATCCCGGGGCTGTCGGCCGATCGCGCGCGGGGCAAGGCCGA
CGCGCAGACCACCGCAGTGTTCGTCGAAGACAACATCTACCTGGGTGAGCGCTGGATCGTCACCCCGGGCCTGCGCTTCG
ACCACCACAGCCAGTTCGGCAACAACACCAGCCCCAGCCTCAATGCGCAGTTCCGCATCAACAGCGACTGGGTGGTGAAG
GGCGGCATCGCCCGCGCGTTCAAGGCGCCGAACCTGTACCAGTCCAATCCGGACTATCTGTACTACACCCGTGGCAACGG
CTGCCCGAATGCACTGCCGAGCCTGGGTGCCGGTTGCTACATGCGCGGCAACGCGGACCTGAAGGCGGAAACCAGCCTGA
ACAAGGAACTGGGCATCGAGTGGGCACCGCAGAGCGGCTGGCAGGCCTCGTTGACCTACTTCCACAACGACTACAAGGAC
AAGATCCAGGCCGGCTACACCCAGGTTGGCCTGACCGCCGACACCAAGGGCCGCATCTTCCGCTGGGAGAACGCGCCCAA
GGCGATCGTGCAGGGGCTTGAAGGCAACCTGGTGATCCCGCTGCTGGGCGAGCAGGGCAACCGCCTGAAATGGAGCAACA
ACTTCACCTACATGGTGGAAAACGAGAACAAGAGCACCGGCCAGCCGCTGTCGGTGATCCCGAAGTACACCGTCAACACG
ATGCTGGACTGGCAGGCCACCGACAAGCTGTCGGTGCTGCTGACCGGCACGTTCTACGGCAAGCAGGAACCGGCCACCGC
CAACATCAACAATGATCCGCGCTGCACCGGCAGCTGCGATCCCTCGATCGCGCTGCAGGACCGCGGTGCCTACAACATCT
GGGGCGTGAGCGCGCGCTACAAGGTGACCGAGACGGTCAGCTTCGGCTTCGGCGTGAACAACCTGGCCGACAAGCGCCTG
TTCCGCGAGGCCAACAGCAGCGATGCCGGTGCGGCGACCTACAACGAACCGGGCCGCGCCTACTGGGCCAGCCTGCGCTT
CGGGTTCTGA

Protein sequence :
MSPAVVLSPRPLALAVAALLAGSALTARAETDATDIDTVHVTASQIARQALGTSTITAEDIAKRPPANDIAELLRTMPGV
NLTGNSASGQYGNNRQIDLRGMGPENTLILVDGKRIGARDAVRMGRSGERNTRGDTNWVPAEMIERIEVLRGPAAARYGS
GASGGVVNIITKRPTGDLTGAVDLYGLVPEHSAEGGSERVGLQLSGPMTDTLSFRLYGNLNKTDADSLDLNRQYATNPNA
VPPAGREGVKNRDVNALLRWDITADQVVEFEAGTSRQGNIYAGDRAVSTTGTSTGVDLAALADGEAETNRMYRNTGAITH
RGRWGDVTSRVTAAVEAVNNSRINEGLAGGPEGSFNGTDWSTSRLRNYQLDGEVSFPTSLGSVENIWTLGFEYLDSRLTD
PYSMSQSSSSGGGIPGLSADRARGKADAQTTAVFVEDNIYLGERWIVTPGLRFDHHSQFGNNTSPSLNAQFRINSDWVVK
GGIARAFKAPNLYQSNPDYLYYTRGNGCPNALPSLGAGCYMRGNADLKAETSLNKELGIEWAPQSGWQASLTYFHNDYKD
KIQAGYTQVGLTADTKGRIFRWENAPKAIVQGLEGNLVIPLLGEQGNRLKWSNNFTYMVENENKSTGQPLSVIPKYTVNT
MLDWQATDKLSVLLTGTFYGKQEPATANINNDPRCTGSCDPSIALQDRGAYNIWGVSARYKVTETVSFGFGVNNLADKRL
FREANSSDAGAATYNEPGRAYWASLRFGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 8e-122 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_1265 YP_006184006.1 TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins VFG0923 Protein 4e-124 48
SMD_1265 YP_006184006.1 TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins VFG1650 Protein 5e-122 47
SMD_1265 YP_006184006.1 TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins VFG0935 Protein 8e-122 47