Gene Information

Name : SMD_2987 (SMD_2987)
Accession : YP_006185678.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : polysaccharide deacetylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3304658 - 3305515 bp
Length : 858 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGATGCCCGAACCGTACCGGTGCTGATGCACCACCACGTCAGTCCGTCGCCGGGCATGATCACCGTGTCACCGGA
GAATTTCGAAAGCCAGATCGCGTGGCTGGCCGGCAACGGCTGGACGTCGCTGACACTGGACCAGTACGCCGGCTTCCTGG
CCGGCAAGCCGGTGCCGCGCAAGTCGATCGTGATCACCTTCGACGATGGCTACCTGGACAACTGGGTGTATGCGCACCCG
ATCCTGCAGAAGTACGGCATGCACGCGGTGGTGTTCGTGGTCACCGGCTGGATGGGCGAAGGCCCGGAGCGGCCCCACGC
CGGGCTTGCCGGGGCAACGTTGCCTGCCACGCCGGACCATCGCGGCTGCGAAGCGGCGATCTACGAGCAGAACCGCAGCG
ACGACGTGATGATGCGCTGGAGCGAAGCGCGCGCGGCCATCGCCGCCGGCACCTTCGAAGTGCATTGCCACACCCATACC
CACACCCGCTGGCTGCGCCGCGACGACCTGGACCGCGCACAGCGCCGTGCCGGCCTGAGCCACGACCTGGCAGTCTCGCG
CAACGTCCTGCAGGACAAGCTTGGCGAGGTGTCCGATACGCTGTGCTGGCCCTACGGCGATTTCGACCAGGACCACATCG
AGGTGGCGCGCGAGCACGGCTTCCGCTACCTGCATACCACCCACCCGTTCGGACGCAATGTGGTGGGCGGCGACCCGGAG
CGCATCTATCGTTTCGCGATCCGCAACCGCCCGGCCAGCTGGCTGCGAAAACGCATCGCACAGAGCTACAACCCGCTGAT
CGCACCGCTGTTCAATGGCTTCAAGGCACGCCAGAAGAAGATGGTGCCGGGGCCGTAG

Protein sequence :
MADARTVPVLMHHHVSPSPGMITVSPENFESQIAWLAGNGWTSLTLDQYAGFLAGKPVPRKSIVITFDDGYLDNWVYAHP
ILQKYGMHAVVFVVTGWMGEGPERPHAGLAGATLPATPDHRGCEAAIYEQNRSDDVMMRWSEARAAIAAGTFEVHCHTHT
HTRWLRRDDLDRAQRRAGLSHDLAVSRNVLQDKLGEVSDTLCWPYGDFDQDHIEVAREHGFRYLHTTHPFGRNVVGGDPE
RIYRFAIRNRPASWLRKRIAQSYNPLIAPLFNGFKARQKKMVPGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shf AAL08449.1 putative protein Shf Not tested SRL Protein 5e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_2987 YP_006185678.1 polysaccharide deacetylase VFG1040 Protein 3e-36 43