Gene Information

Name : SMD_3736 (SMD_3736)
Accession : YP_006186413.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4183809 - 4184477 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
GTGTTCCAGGTGGGTGAAGTCATGACCCATGCATTGCGCTCCATCGACCTGTCGGTGCAGGAGGGCGATTTCCTCTCGAT
TACCGGCCCTTCCGGCTCCGGCAAGTCCACACTGCTGAACATCCTCGGTCTGCTCGAGGGCTTTTCCGGCGGCCACTACG
CGATCGGTGGCGTGGATGTTGGCGGCATGCGCGACGCGGCGCTCAGCGCGCTGCGCAACGAGAAGATCGGCTTCGTGTTC
CAGGCGTTCAACCTGATTCCGGATCTGACCATCCAGGCCAATGTGGAGGTGCCCCTGCGCTACCGTGGCATGGCGGCAGC
CGAATGCAGGCAGCGTGTGGTCTCGGCACTGGCCCAGGTCGGACTGGGCAGCCGCATGTCGCACTATCCCGGCGAACTGT
CGGGCGGGCAGCAGCAGCGCGTGGCGATCGCCCGCGCCATCGCGGGTACGCCGGCCCTGCTGCTGGCTGACGAGCCGACC
GGAAACCTGGACTCGCAGATGTCGCAAGGGGTCATGGAGATTCTGCGTGAGCTCAACCAGGGCGGCATGACCATCATCAT
GGTGACGCATGACAAGGAGCTGGCGGCGTGCGCGGGTCGCAGCGTCCACATCGTGGATGGGCAGATCGTCGAGGTCACAG
CGCAGGCCATGCAGGCGCTGTGCGCCTGA

Protein sequence : 
MFQVGEVMTHALRSIDLSVQEGDFLSITGPSGSGKSTLLNILGLLEGFSGGHYAIGGVDVGGMRDAALSALRNEKIGFVF
QAFNLIPDLTIQANVEVPLRYRGMAAAECRQRVVSALAQVGLGSRMSHYPGELSGGQQQRVAIARAIAGTPALLLADEPT
GNLDSQMSQGVMEILRELNQGGMTIIMVTHDKELAACAGRSVHIVDGQIVEVTAQAMQALCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-23 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-23 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_3736 YP_006186413.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-35 50
SMD_3736 YP_006186413.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 47
SMD_3736 YP_006186413.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-30 43
SMD_3736 YP_006186413.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 5e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_3736 YP_006186413.1 ABC transporter ATP-binding protein VFG0869 Protein 5e-16 41