Gene Information

Name : SMD_0509 (SMD_0509)
Accession : YP_006183279.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : Osmosensitive K channel histidine kinase KdpD
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.3.-
Position : 577340 - 578809 bp
Length : 1470 bp
Strand : +
Note : -

DNA sequence :
ATGATCAAGCCGAACCTGTGGCAGAAGCTGGCGGTGGTGACCGCCGCGCTGATGCTGATGTGCTGCATGGCGCTGCTGGC
ACTGCAGATGCGTGCCAACACCCGCCACGAGCAGGAAGTCGTGCAGCGGCTGTCGCTGGGCCTGGCCGAACATATCGCCC
AGCGCAGCGAGCTGATGGACACCAGCGGCATGCGCGATGCCGCGGTGCGCGCGCTGTTCGGCCAGCTGATGGCGGTCAAC
CCCAGCGTCGAGGTCTACCTGCTGGACGACCAGGGCCGCATCCTCGGTCACGATGCACCCAGTGGACATCTGGTGCGCAA
CCGGGTGGATGTGGCGCCGTTGCGTCGCCTGCTGGCCGGTGCACCGTTGCCGATCCTCGGCGATGACCCGCGCAGCGCCG
ATGGCCGCAAGGTGTTCAGTGCCGCACCATTGATCGTGCAGGGCCGGCCGGCCGGCTATGTGTACGTGGTGCTGGTCGGC
GAGCACCGGCAGATGCTCGCCGACGATCTTGCCGCCGGCAGCCAGTGGAACACCACGCTGTGGTCGGTGGTGCTGGTCGG
CAGCCTCGGCCTGTTGGCCGGGCTGGTCGCGTTCTACTGGGTGACGCGTCCGTTGCGGCGGCTGACCCGGCGGATCCAGG
CCTTTGACATCGATGCGCCGCCGCCGCTGCCGCCGCCGGAGCCGCTGCGCGCTGGTGAGCGCGACGAACTGGTGATCCTG
GAACATGCGCACGCGCAGATGGCGCAGCGGCTGGGCGAGCAGTGGCAGCAGCTGCGCCAGCAGGATCTGCAGCGCCGTGA
ACTGGTCGCCAACATCTCGCACGACCTGCGCACGCCGTTGTCGTCGCTGCACGGCTACCTGGAAACGCTGGCGTTGAAGG
ACGCCACGCTGTCACCGGACGAGCGCCGCCGCTATCTCGGCATTGCGCTGGCACAGAGCGCCAAGGTCGGCCGGCTGGCG
CGCGCGCTGTTCGAACTGGCGCGGCTGGAGCACGGCGAAGTGCGGCTGGAGTGGGAAGTGTTCGCGCTGCCGGAGCTGCT
GCAGGACGTGCTGCAGAAGTTCGAACTGGCGGCACAGGCGCGTGGCCAGCAGCTGCACGCGGCGTTTCCGCCCGGCCTGC
CGCTGGTCCGTGCGGACCTGGGCCTGGTCGAGCGGGTGCTGACCAACCTGCTCGACAACGCGCTGCGCCATGCACCCGAG
GGTGGCCAGATCGAGGTGCGCCTGCGCGCGACCGCCGACAGCGTGGAGGTCTGCGTCGCCGATGATGGCCCCGGGGTAGC
CCCGGCGCTGCGTACCCAGCTGTTCCAGGCACCGGCCGCGCTCGGCGCGCGGCGTGGCGACAACGGCGGATTGGGCCTGT
TGATCGTGCAGCGCATCGTGCAGTTGCATGGCCGCCGCATCGAACTGCGCGACAGCGAACGGGGCGCGCTGTTCGTGTTT
GCCTTGCCGCGCGCGGAAACGGCGGTCTAG

Protein sequence :
MIKPNLWQKLAVVTAALMLMCCMALLALQMRANTRHEQEVVQRLSLGLAEHIAQRSELMDTSGMRDAAVRALFGQLMAVN
PSVEVYLLDDQGRILGHDAPSGHLVRNRVDVAPLRRLLAGAPLPILGDDPRSADGRKVFSAAPLIVQGRPAGYVYVVLVG
EHRQMLADDLAAGSQWNTTLWSVVLVGSLGLLAGLVAFYWVTRPLRRLTRRIQAFDIDAPPPLPPPEPLRAGERDELVIL
EHAHAQMAQRLGEQWQQLRQQDLQRRELVANISHDLRTPLSSLHGYLETLALKDATLSPDERRRYLGIALAQSAKVGRLA
RALFELARLEHGEVRLEWEVFALPELLQDVLQKFELAAQARGQQLHAAFPPGLPLVRADLGLVERVLTNLLDNALRHAPE
GGQIEVRLRATADSVEVCVADDGPGVAPALRTQLFQAPAALGARRGDNGGLGLLIVQRIVQLHGRRIELRDSERGALFVF
ALPRAETAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-67 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_0509 YP_006183279.1 Osmosensitive K channel histidine kinase KdpD VFG1701 Protein 7e-68 45