Gene Information

Name : S70_17090 (S70_17090)
Accession : YP_006217921.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : RTX toxin ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3593807 - 3595894 bp
Length : 2088 bp
Strand : -
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGGAAAGTGAAAATACTCAGTCAGCACTCTACTTTATTGGCATCATCATTAAGTTAACAAGTGATATTAGTCAAGACGA
GTTTAATACCATCACCGCAGAGAAAGAAAGTTTCCGTGATACATTAAAAGCGCTTCAAAACAAGCTTAATATAAAGTGTA
AATATAAAAATCAAACCAATAAAAACATTAGTAAGATAGATTCTCCTTCTATTATTTATGATAATGATAACGTAGCTTAT
CTATTAGCTAATTTTAATCATGAACAAGTTCTTATTCAGCGATTTGGTAACCATCCTCCAGAATTATGGAGTATGGATAA
GTTTATCCAAATGTGGAGTGGTAAATGGCTACAGGTTAAAACCAAACAAAGCCAATTTGATATTACTTGGTTTAAAACAG
AATTTTTGAAATATAAATATATTATCGCTAGCGTTTTATTATTTTCATTTATTTTGCAAATACTCGCATTAGTGACACCA
ATTATTATCCAAGTCATTATGGATAAAGTGTTAGTGCATAATAGTATGATGACATTAGATCTGCTGATCTTTGGTCTTAT
TATTGCCGCCATCCTTGAAGTGACGCTTAAAGGGCTGCGTGAGTATGTTTATAACCATACCGTTAACCGTATCGATATGA
CTTTAGGGTTAAAGTTGGTCAATCATTTACTACATCTGCCCCTTTCGTTTTTTAAAACTCGGCAAATTGGTGCAATCGTT
ACACGCGTTAAAGAGCTAGAGACTATTCGCGAGTTTTTGACAGGAAGTTTTTTTACACTCTGTGTTGATGTGCTCTTTTT
ATTTGTTTTTCTTTATGTCATGAGCCTATTATCCTCAACCTTAATGTTGGTTTTTTTATGCTCAATTCCCTTCTATTTAT
TAGTTGCTTGGTGGCTGACGCCTAAAATTGAGGCCGCGGCCCATAAGCAATTTGCAAATATTGCCATCAACACCTCATTT
TTAACCGAAAGTATTAATGGTATTGAAACAGCCAAAAGCCTCTCAATAGAGCCCAATTTTACTCGCCGCTGGGATCAGCA
AACTTCTGATATGAGTCATACGACATTTGCGGCAGGCCAAATCAACTCCCGCTCTGAACATATTGTGATGGTGATTGAGA
AATTAACCAGCGCCGTTATTTTGTGGATTGGTGCCTCTGAAGTCTTAGCCTTACAGCTTACTATTGGTCAATTTATTGCA
TTTCATATGATGGTCAATCATGCAAGCCAGCCTCTTGTTAAGTTGGTTAAGCTCTGGGGGGATTATATTAGAACCAAAGT
TGCCATTGAAAAATTAGCGCAAATTATCAATTTGCCGACAGAGCAAACAAAACAAGCAGATAATAACACCTTAAAAGGCC
ATATCCATTTGCGTAATATCTCTTTTCGCTATCAACCTGACATGCCTTATATTCTCGATAATTTTAATTTATCGATTCAG
GCTGGTGAAACATTAGGCATTGTTGGTACATCTGGCTCAGGGAAAAGTACTCTTGCACGTTTATTACTCCGATTATATAC
CCCTGAGAAAGGAACGATCCTATTAGATGGCACTCCTCTTTCATCGATGAATATTCATTCGCTCAGAAGGCAAATTGGCA
TCGTATTACAAGAAAACTTTCTTTTTAACCAAACCGTTTTCGATAATATTGCGCAAACTTATCCCAATGCGTCAATGGAT
GAAGTCATACATGCCGCCAAAATGGCGGGGGCCCATGATTTTATCTTAAAATTACCGATGGGTTATGACACCATATTATC
CGAAGGAGGCGCATCACTGTCTGGGGGACAACGCCAAAGAATTGCTATTGCACGTACACTGCTCGCCGACCCTAAAATTA
TTATTTTTGACGAAGCCACCAGCGCATTAGATGATGAGTCTCAAGCTATCATTCAAAAAAATATGCAGCTTATTGCTCAG
GGCAGAACGGTAATTACGATTGCTCATCGCCTTTCTACTATTCGTCATCACCAACGTATTATCGTGATGCAACAAGGCAA
AATTGTTGAACAAGGAAGCCATCAACAATTACTTGAGCAAGGCCAGTTTTATCAACATTTATGGGCGTTACAGCAATCTT
TTAAATAA

Protein sequence :
MESENTQSALYFIGIIIKLTSDISQDEFNTITAEKESFRDTLKALQNKLNIKCKYKNQTNKNISKIDSPSIIYDNDNVAY
LLANFNHEQVLIQRFGNHPPELWSMDKFIQMWSGKWLQVKTKQSQFDITWFKTEFLKYKYIIASVLLFSFILQILALVTP
IIIQVIMDKVLVHNSMMTLDLLIFGLIIAAILEVTLKGLREYVYNHTVNRIDMTLGLKLVNHLLHLPLSFFKTRQIGAIV
TRVKELETIREFLTGSFFTLCVDVLFLFVFLYVMSLLSSTLMLVFLCSIPFYLLVAWWLTPKIEAAAHKQFANIAINTSF
LTESINGIETAKSLSIEPNFTRRWDQQTSDMSHTTFAAGQINSRSEHIVMVIEKLTSAVILWIGASEVLALQLTIGQFIA
FHMMVNHASQPLVKLVKLWGDYIRTKVAIEKLAQIINLPTEQTKQADNNTLKGHIHLRNISFRYQPDMPYILDNFNLSIQ
AGETLGIVGTSGSGKSTLARLLLRLYTPEKGTILLDGTPLSSMNIHSLRRQIGIVLQENFLFNQTVFDNIAQTYPNASMD
EVIHAAKMAGAHDFILKLPMGYDTILSEGGASLSGGQRQRIAIARTLLADPKIIIFDEATSALDDESQAIIQKNMQLIAQ
GRTVITIAHRLSTIRHHQRIIVMQQGKIVEQGSHQQLLEQGQFYQHLWALQQSFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 3e-108 44
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 4e-108 43
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 4e-108 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_17090 YP_006217921.1 RTX toxin ABC transporter VFG0907 Protein 1e-108 44
S70_17090 YP_006217921.1 RTX toxin ABC transporter VFG1269 Protein 1e-119 43
S70_17090 YP_006217921.1 RTX toxin ABC transporter VFG1557 Protein 2e-108 43
S70_17090 YP_006217921.1 RTX toxin ABC transporter VFG1501 Protein 2e-108 43
S70_17090 YP_006217921.1 RTX toxin ABC transporter VFG0841 Protein 1e-102 43