|
Name : HPB14_01080 (HPB14_01080) Accession : YP_006218949.1 Strain : Helicobacter pylori HUP-B14 Genome accession: NC_017733 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : - COG ID : - EC number : - Position : 218127 - 219290 bp Length : 1164 bp Strand : + Note : COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAAGAGATCATGGATCCTTTTTT AAGGGATCATTACGGGAACCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCGTTAGATA AGCTTTATAAAGGCATTAACGCTAGGGATATAGACGATGTGATCATCACTTCTTGCGCGACAGAGAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAGGGCAAAAACCATATTGTAACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGCAATTTTTTAGAAAGCTTGGGGGTGGAGGTTACTTACTTGCCTATTAATGAGCATGGGAGTATCACCG CCGATCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTCTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATTGGGGCTATTTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATACCTGTAGATGTGTTAAAAGCGAATGCGGATTTTCTTTCTTTTAGCGCGCACAAGTTTCATGGGCCTAAAGGCATTG GAGGTTTATACATTAGAAGTGGGGTGGGATTGACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGCAGGCGCAGCGGG ACTTTGAATGTGCCTTATATTGTGGGCATGGGCGAAGCGATGAGATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTGGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTAGGCGATCGAGTCCATC GTGTGCCTAACACGACTTTAGTCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTAAACCGCTCTAATATC GCCGCTTCCACAGGGAGCGCGTGCGCGAGTGAGGATTTAGAGGCTAATCCTGTCATGGTAGCGATTGGAGCGAGTAAGGA ATTGGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAGATTGACAAAACGATTGAAGTTTTCT CTCAAGCGGCTATAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIVTTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITADQVKEAITEKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANADFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMRLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRVHRVPNTTLVSVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAIRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 4e-49 | 41 |
