Gene Information

Name : rnhA (HPB14_03365)
Accession : YP_006219392.1
Strain : Helicobacter pylori HUP-B14
Genome accession: NC_017733
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 687365 - 687796 bp
Length : 432 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAAATTGAAATTTTTTGCGATGGTTCTTCTTTGGGTAATCCCGGGCCAGGCGGTTATGCGGCGATTTTACGCTA
TAAAGATAAAGAAAAAATCATCAGTGGGGGCGAAAATTTCACCACGAATAACCGCATGGAATTAAGAGCGCTCAATGAAG
CCTTAAAAATTTTGAAACGCCCATGCCATATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGTTTGG
CTGACTAACTGGCAAAAAAAGAATTTTGCTAAAGTTAAAAATGTGGATTTATGGAAAGAATTTTTAAAAGTCTCTAAAGG
GCATTTGATTGTGGCTGTTTGGATCAAGGGGCATAATGGGCATGCCGAAAACGAACGATGCGATAGCCTCGCTAAATTAG
AGGCGCAAAAACGGGTCAAAACGACCACTTAA

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKIISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVW
LTNWQKKNFAKVKNVDLWKEFLKVSKGHLIVAVWIKGHNGHAENERCDSLAKLEAQKRVKTTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 8e-28 51