Gene Information

Name : rnhA (HCW_05725)
Accession : YP_006223037.1
Strain : Helicobacter cetorum MIT 00-7128
Genome accession: NC_017737
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 1236964 - 1237398 bp
Length : 435 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGAAAAGCAATTTAAAAGACATTGAAATTTTTTGCGATGGCTCTTCTTTAGGAAATCCCGGTCCGGGAGGTTATGCAGC
GATTTTACGCTATAAAGATAAAGAAAGAATTGTGAGTGGGGGCGAGAGCCTAACTACAAATAATCGCATGGAATTAAGAG
CATTAAACGAGGCTTTAAAGGTTTTAAAGTCCCCTTGCAAAATCACTCTTTATAGCGATTCGCAGTATGTATGCCAAGCG
ATTAATGCTTGGCTGGATAGTTGGAAAAAGAGAAATTTTGCTAAAGTAAAAAATGTAGATTTATGGAAAGAATTTTTAGA
AGTGTCAAAAACACACTCTATCATTGCGATTTGGGTTAAAGGGCATAATGGACATGCTGAAAATGAACGCTGTGATAGTT
TGGCTAAATTAGAGGCACAGAAATTTAAAAAGTAA

Protein sequence :
MKSNLKDIEIFCDGSSLGNPGPGGYAAILRYKDKERIVSGGESLTTNNRMELRALNEALKVLKSPCKITLYSDSQYVCQA
INAWLDSWKKRNFAKVKNVDLWKEFLEVSKTHSIIAIWVKGHNGHAENERCDSLAKLEAQKFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-29 53