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Name : HPSH417_01075 (HPSH417_01075) Accession : YP_006223864.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : - COG ID : - EC number : - Position : 210928 - 212586 bp Length : 1659 bp Strand : + Note : COG0471 Di- and tricarboxylate transporters DNA sequence : ATGGAAAATCATTCGCATGCCAATACGCATACAGATACGCGCGCCGATGATAAAAGCACTAAGATCGTGCGCTTGTTGGG GTTAATAGGAGGGGCGTTGATCGCGCTCATTATCTATTACGCTTTAAACGCTCAACTGCCTCATATTGTAGAAGAAATCC CCAAGCTTAATTCCTTAAATTATAAGGCGATGCCTGTTGTGGCTGGGGTGGCTGTTTTAATGGGGATATGGTGGATGACT GAAGCCATTGACCTGCCCGCAACCGCGCTTTTACCTTTAGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCGCTAGCGT TAGCTCTTCTTACGCATCGCCGATTATCTTTCTTTTTATGGGAGGGTTTATTTTAGCTTTAAGCATGCAAAAATGGAATT TGCACACGCGCATCGCTTTAAGCATTATTTTATTAGTAGGCACAAGCCCTAGGAGGTTGATTTTAGGTTTCATGATAGCT ACAGGCTTTCTGTCTATGTGGGTGAGCAATACCGCAACGGCGGTGATGATGCTCCCTATTGGCATGAGCGTTTTGCAATT AGTCGCTAAACTTGTGGGCAAAGAAAACGCCTCTAATTCATGGCATCAAAAAGAAGAAATCACCAAAGCGCATGGGGGCA TTATGGGAAATATCGTGCATAAGGGCAAAGATATTTCTCAAGTCATTCAAGAAAAGACCATCATTTATCGCACGAATTTC AGTATTTGCTTGATGCTTGGCATCGCTTATGCGGCTTCTATTGGTTCTTTAGGCACTCTTATTGGCACGCCGCCTAACGC TTTATTAGCCGGCTATATGAAAACCGCTTTCAATATTGAAATTGATTTCGCTCAGTGGATGGTGTTTGGGACGCCGTTAG CCTTCATCATGCTCATTTTATCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGGGGT AAGGAAGTCATTAGGGTAGAGTTAAAAAAATTAGGCCGCTTGAGTTGGGCAGAAATCTCTGTGGGCGTTATTTTTATTTT GGCGTCTTTAGGGTGGATTTTTTTAGATACGATTTTAAAATCTTGGGGCATTAAGATAGATAAAATTGATTCAGTGATTG CGATGGGGGTTTCTGCGCTTTTATTCATTTTGCCCGCTAACCATCATGGCGATAGGCTCATTGATTGGGGTGTTGCTAAA AAACTCCCTTGGGATGTGTTGCTTTTATTTGGCGGCGGGTTAGCCTTGAGCGTGCAATTTTCTAAAACCGGGTTGAGTTT GTGGATTGGGCATTTAGTTTCTGGCTTTTCGCATTTACCGATTTTATTCATTATTTTCATGGTCACTTTAATGGTCATTT TCTTAACCGAAATCACTTCTAACACCGCCACCGCTGCGGCGTTTTTACCGGTGATTGGAGGGGTTGCGATGGGCATGGGT TATGAAAATCATCAGAGCTTGTTATTGACCATTCCTGTAGCCTTGAGCGCAACTTGCGCGTTCATGCTCCCTGTAGCCAC CCCACCCAATGCGATAGCTTATGGCTCTGGGTATGTTAAAATAACGGATATGATTAAAGCCGGTTTGTGGCTTAATCTGG TAGGAGTTGTTTTGATTAGCGCATTTAGCTATTTTTTAGTTTCGCTGGTATTTAATTGA Protein sequence : MENHSHANTHTDTRADDKSTKIVRLLGLIGGALIALIIYYALNAQLPHIVEEIPKLNSLNYKAMPVVAGVAVLMGIWWMT EAIDLPATALLPLVLFSVFSVDQFASVSSSYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIA TGFLSMWVSNTATAVMMLPIGMSVLQLVAKLVGKENASNSWHQKEEITKAHGGIMGNIVHKGKDISQVIQEKTIIYRTNF SICLMLGIAYAASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILSWLLLTYVIFPLKIKEIPGG KEVIRVELKKLGRLSWAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANHHGDRLIDWGVAK KLPWDVLLLFGGGLALSVQFSKTGLSLWIGHLVSGFSHLPILFIIFMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMG YENHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYFLVSLVFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 1e-103 | 53 |
