|
Name : HPSH112_01125 (HPSH112_01125) Accession : YP_006226949.1 Strain : Helicobacter pylori Shi112 Genome accession: NC_017741 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : - COG ID : - EC number : - Position : 221441 - 223099 bp Length : 1659 bp Strand : + Note : COG0471 Di- and tricarboxylate transporters DNA sequence : ATGGAAAATCATTCGCATGCCAATACGCATACAGATACGCGCGCCGATGATAAAAGCACTAAGATCGTGCGCTTGTTGGG GTTAATAGGAGGGGCGTTGATCGCGCTTATTATCTGTTACGCTTTAAACGCTCAACTGCCTCATATTGTAGAAGAAATCC CCAAGCTCAATTCCTTAAATTATAAGGCGATGCCTGTTGTGGCTGGGGTGGCTGTTTTAATGGGGATATGGTGGATGACT GAAGCCATTGACCTGCCCGCAACCGCGCTTTTACCTTTAGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCGCTAGCGT TAGCTCTTCTTACGCATCGCCGATTATCTTTCTTTTTATGGGAGGGTTTATTTTAGCTTTAAGCATGCAAAAATGGAATT TGCACACGCGCATCGCTTTAAGCATTATTTTATTAGTAGGCACAAGCCCTAGGAGGTTGATTTTAGGTTTCATGATAGCT ACAGGCTTTCTGTCTATGTGGGTGAGCAATACTGCAACAGCAGTGATGATGCTCCCTATTGGCATGAGCGTTTTGCAATT AGTCGCTAAACTTGTGGGCAAAGAAAACGCCTCTAATTCATGGCATCAAAAAGAAGAAATCACCAAAGCGCATGGGGGTA TTATGGGCAATATCGTGCATAAGGGCAAAGATATTACCCAAGTCATTCAAGAAAAGACCATCATTTATCGCACGAATTTC AGTATTTGCTTGATGCTTGGCATCGCTTATGCGGCTTCTATTGGCTCTTTAGGCACTCTTATTGGCACGCCGCCTAACGC TTTATTAGCCGGCTATATGAAAACCGCTTTCAATATTGAAATTGATTTCGCTCAGTGGATGGTGTTTGGGACGCCGTTAG CCTTCATCATGCTCATTTTATCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGGGGT AAGGAAGTCATTAGGGTAGAGTTAAAAAAATTAGGCCGCTTGAGTTGGGCGGAAATCTCTGTGGGCGTTATTTTTATTTT AGCGTCTTTAGGGTGGATTTTTTTAGATACGATTTTAAAATCTTGGGGCATTAAGATAGATAAAATTGATTCAGTGATTG CGATGGGGGTTTCTGCACTCTTATTCATTTTGCCCGCTAACCATCATGGCGATAGGCTCATTGATTGGGGTGTTGCTAAA AAACTCCCTTGGGATGTGTTGCTTTTATTTGGCGGCGGGTTAGCCTTGAGCGCGCAATTTTCTAAAACCGGGTTGAGTTT GTGGATCGGGCATTTAGTTTCTGGCTTTTCGCATTTACCGATTTTATTCATTATTTTCATGGTCACTTTAATGGTCATTT TCTTAACCGAAATCACTTCTAACACCGCCACGGCTGCGGCGTTTTTACCGGTGATTGGAGGGGTTGCGATGGGCATGGGT TATGAAAATCATCAAAGCTTGTTATTGACCATTCCTGTAGCCTTGAGCGCGACTTGCGCGTTCATGCTCCCTGTAGCCAC CCCACCCAATGCGATAGCTTATGGCTCTGGGTATGTTAAAATAACGGATATGATTAAAGCCGGTTTGTGGCTTAATTTAG TGGGAGTTGTTTTGATTAGCGCGTTTAGCTATTTTTTAGTTTCGCTGGTATTTAATTGA Protein sequence : MENHSHANTHTDTRADDKSTKIVRLLGLIGGALIALIICYALNAQLPHIVEEIPKLNSLNYKAMPVVAGVAVLMGIWWMT EAIDLPATALLPLVLFSVFSVDQFASVSSSYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIA TGFLSMWVSNTATAVMMLPIGMSVLQLVAKLVGKENASNSWHQKEEITKAHGGIMGNIVHKGKDITQVIQEKTIIYRTNF SICLMLGIAYAASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILSWLLLTYVIFPLKIKEIPGG KEVIRVELKKLGRLSWAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANHHGDRLIDWGVAK KLPWDVLLLFGGGLALSAQFSKTGLSLWIGHLVSGFSHLPILFIIFMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMG YENHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYFLVSLVFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 4e-104 | 53 |
