|
Name : HPPC18_01100 (HPPC18_01100) Accession : YP_006228504.1 Strain : Helicobacter pylori PeCan18 Genome accession: NC_017742 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : - COG ID : - EC number : - Position : 224549 - 225712 bp Length : 1164 bp Strand : + Note : COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes DNA sequence : TTGTTACAACGAATCTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAAGAGATCATGGATCCGTTTTT AAGGGATCATTACGGGAATCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCGGCCATTGCAGAAGCTTTAGATA AGCTTTATAAAGGCATTAACGCTAGGGATATAGATGATGTGATCATCACTTCTTGCGCGACAGAGAGCAATAACTGGGTG TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAAGTAAAAACCATATTATCACCACGGTTGCAGAGCACCCGGCGGT GCGATCCACTTGTAATTTTTTAGAAAGCCTGGGGGTGGAGGTTACTTACTTACCTATTAATGAGCATGGGAGCATCACCG CAGAGCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTTTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATCGGGGCTATTTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTGAAGGCGAACGTAGATTTCCTTTCTTTTAGCGCGCACAAGTTTCATGGGCCTAAAGGCATTG GGGGGTTGTATATTAGAAGTGGGGTGGGGTTGACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGCAGGCGCAGTGGG ACTTTGAACGTGCCTTATATCGTGGGCATGGGCGAAGCGATGAAATTAGCCGTAGAGCATTTAGATTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGCGATAGAATCCATC GTGTGCCTAACACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTGAATCGCTCTAATATC GCCGCTTCCACAGGGAGCGCGTGCGCGAGTGAGGATTTAGAGGCTAACCCCGTAATGGTGGCGATTGGGGCGAGTAAGGA ATTGGCTCATACCGCTATCAGGCTCTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGATAAAACGATTGAAGTTTTCT CTCAAGCGGCTGTAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKSKNHIITTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITAEQVKEAITEKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 5e-49 | 41 |
