Gene Information

Name : rnhA (HPPC18_03200)
Accession : YP_006228900.1
Strain : Helicobacter pylori PeCan18
Genome accession: NC_017742
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 671604 - 672035 bp
Length : 432 bp
Strand : +
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAAATTGAAATTTTTTGCGATGGCTCTTCTTTAGGTAATCCCGGACCAGGCGGGTATGCGGCGATTTTACGCTA
TAAAGATAAAGAAAAAATCATCAGTGGAGGCGAAGAATTCACCACGAATAACCGCATGGAATTAAGAGCGCTCAATGAAG
CGTTAAAAATCTTGAAACGCCCATGCCATATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGTTTGG
CTGATTAACTGGCAAAAAAAGAATTTTTCTAAAGTTAAAAATGTGGATTTATGGAAAGAATTTTTAAAAGTCTCTAAAGG
GCATTTGATTGTGGCTGTTTGGATCAAGGGGCATAATGGGCATGCTGAGAATGAACGATGCGATAATCTCGCTAAATTAG
AGGCGCAAAAACGGGTCAAAACGACCACTTAA

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKIISGGEEFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVW
LINWQKKNFSKVKNVDLWKEFLKVSKGHLIVAVWIKGHNGHAENERCDNLAKLEAQKRVKTTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-27 51