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Name : NT08PM_1100 (NT08PM_1100) Accession : YP_006239980.1 Strain : Pasteurella multocida 3480 Genome accession: NC_017764 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1175590 - 1177440 bp Length : 1851 bp Strand : + Note : - DNA sequence : ATGTTAAATCGTTACCCTCTTTGGAAGAACCTAATGGTGATCCTCGTGATCGCCATTGGCGTTTTATACTCTCTTCCAAA TCTTTATGGTGAAGATCCCGCAGTGCAAATTTCCGGCACCCGAGGACAAGAAGCCAATGCTCAAATATTTAGTGAAGTCC AAACTTTATTAAATCAAAACAACTTAGAAACCAAATCGATTATTCTAGAAAATGGCTCTATTCTTGCTCGTTTTCATAAT ACCGATGATCAATTGCTTGCCAAAGATAAACTGTCTGAAAAATTAGGTAATGGCTATTCTGTTGCCTTAAACCTTGCGCC GGCAACACCGAAGTGGCTCACTTCAGTTGGCGCTTATCCGATGAAATGGGGATTAGACTTACGTGGTGGTGTCCGCTTCT TAATGGAAGTGGATATGAAATCGGCTTTACATAAACGTCAAGAACAATTACAAGACAACCTGCGTACCCAATTACGTAAA GAAAAATATCAGTATACGGGGATTAAATCTGCTGAAAATTTCAGTACGCTCGTCACCTTATTAAAACCAGAACAACTGGA TGAGGTACAACGTTTTTTACGTAAACAGCATCATAATTTAGAGATTAAAAGCGTTTCAGACAATACCTTAGCGTTAACCC TTTCTGAAGCCGCACTCAATGAATCTCGTGAAAGTGCTATTGAGCAAAACTTGACGATTTTACGTAAACGTGTGTCTGAA TTGGGTGTATCTGAAGCAGTGATTCAACGTCAAGGCGCTGAACGTATTGTGGTTGAGTTACCTGGTGTACAAGATACCGC GCGTGCGAAAGAAATCCTAGGCGCAACCGCGACGTTGGAATTCCGTTTAGTCAATGAAAATGTCAATCTTGATTCGGCAA CACGCGGCTTTGTACCAAATGATTCAGAAGTAAAATTGGATCGCAATGGTCGCCCAGTTGTCCTGTATAAACGTGCCGTA CTCGGTGGTGAACATATTACTAACGCCAGTTCAGGGCTAGATCAACAAACTTCCCGTCCGCAAGTCAGCGTGACCTTAGA CAGTGAAGGTGGCGAGATCATGTCACAAGCCACCCGTTTGAATCTGAAAAAACCGATGGCGACGTTATATGTCGAATATA AAGACAGCGGTAAGAAAGATGAAAATGGCAAAGCGATCTTAGAAAAACACGAGGAAGTCATTAACGTCGCGACGATTCAA GGCCGTTTTGGTAGCCAATTCCAAATTACCGGCATTGATAGCCCTGCAGAAGCGTTAAATCTTGCAGTGTTACTCCGTTC TGGTGCCTTAATTGCCCCCATTCAAATTGTCGAAGAACGCACGATTGGACCATCACTGGGGGCTGAAAACGTACGCCAAG GTTTAGAGGCCAGTTTCTGGGGCTTACTCGCCGTCATTATTTTCATGACACTTTACTATCGTAAATTTGGTTTGATCGCT AATATTGCGTTGATTGCGAATATTGTTTTAGTGGTTGGTTTAATGTCATTACTGCCGGGCGCCACCTTGTCAATGCCAGG AATTGCCGGAATCGTACTATCCGTTGGGATGTCCATTGATGCTAACGTACTGATCTTTGAACGTATCAAAGAAGAAATCC GTAATGGTAGACCTATTCAGCAAGCCATTCACGAAGGCTATTCTGGCGCATTCACCAGTATTTTTGATGCAAACTTAACC ACCATTCTCACCTCCGTGATTCTTTATGCCGTGGGTGCAGGTCCGGTGAAAGGCTTTGCAATTACACTTGCCCTTGGGGT AGGGATTTCCATGTTTACCGCCATTGTCGGCACACGTGCAATCGTCAACTTCTTGTACGGCGGTAAACGTATAAACAAAT TGTCAATTTAG Protein sequence : MLNRYPLWKNLMVILVIAIGVLYSLPNLYGEDPAVQISGTRGQEANAQIFSEVQTLLNQNNLETKSIILENGSILARFHN TDDQLLAKDKLSEKLGNGYSVALNLAPATPKWLTSVGAYPMKWGLDLRGGVRFLMEVDMKSALHKRQEQLQDNLRTQLRK EKYQYTGIKSAENFSTLVTLLKPEQLDEVQRFLRKQHHNLEIKSVSDNTLALTLSEAALNESRESAIEQNLTILRKRVSE LGVSEAVIQRQGAERIVVELPGVQDTARAKEILGATATLEFRLVNENVNLDSATRGFVPNDSEVKLDRNGRPVVLYKRAV LGGEHITNASSGLDQQTSRPQVSVTLDSEGGEIMSQATRLNLKKPMATLYVEYKDSGKKDENGKAILEKHEEVINVATIQ GRFGSQFQITGIDSPAEALNLAVLLRSGALIAPIQIVEERTIGPSLGAENVRQGLEASFWGLLAVIIFMTLYYRKFGLIA NIALIANIVLVVGLMSLLPGATLSMPGIAGIVLSVGMSIDANVLIFERIKEEIRNGRPIQQAIHEGYSGAFTSIFDANLT TILTSVILYAVGAGPVKGFAITLALGVGISMFTAIVGTRAIVNFLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-115 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-116 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-115 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-115 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-115 | 46 |
