Gene Information

Name : NT08PM_1386 (NT08PM_1386)
Accession : YP_006240263.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1446233 - 1446973 bp
Length : 741 bp
Strand : -
Note : CcmC

DNA sequence :
ATGTGGAAATGGTTACATCCTTATGCAAAATCAGAAACACAGTATCACTTGTGCGGTAAATTTTTACCCTTAACGGCGTT
ACTGAGCGCACTTTTATTAGGCGTGGGCGTCGTGTGGGGACTGGCATTTGCCCCAGCAGATTATCAACAAGGCAATAGTT
TTCGGATCATGTATGTGCATGTACCCACCGCAATTTGGTCGATGGGTGTGTATGGTTCGATGGCGATTGCGGCTTTTATT
GCGTTAGTGTGGCAAATCAAACAGGCACACTTAGCCATGATAGCGATGGCACCGATTGGTGCATTGTTTACTTTTTTAGC
TTTGGTTACTGGTGCTGTGTGGGGTAAACCAATGTGGGGCACTTGGTGGGTATGGGATGCCCGTTTGACCTCAGAATTGA
TTTTATTTTTCCTGTATTTAGGGGTGATGGCACTTTATTCAGCCTTTCAAGATCGTGCTATTGGCGCAAAAGCAGCAGGA
GTCCTGTGTTTAGTGGGGGTGATTAATTTACCGATCATTCATTTTTCAGTAGAGTGGTGGAATACCCTACATCAAGGAGC
GAGCATTACGAAATTTGAGAAGCCTTCAATTGCGACCCCCATGTTAATTCCACTGATTCTCTGTATTTTTGGTTTTATGA
TGTTATACATTTGGTTGACGCTAATCCGCTATCGTAGTGCGCTGCTGAAAGAAGACCATAAGCGTCCTTGGGTACAAGAA
TTAGCCACAAAACTCAAATAG

Protein sequence :
MWKWLHPYAKSETQYHLCGKFLPLTALLSALLLGVGVVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGVYGSMAIAAFI
ALVWQIKQAHLAMIAMAPIGALFTFLALVTGAVWGKPMWGTWWVWDARLTSELILFFLYLGVMALYSAFQDRAIGAKAAG
VLCLVGVINLPIIHFSVEWWNTLHQGASITKFEKPSIATPMLIPLILCIFGFMMLYIWLTLIRYRSALLKEDHKRPWVQE
LATKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 5e-40 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_1386 YP_006240263.1 protein CcmC VFG1856 Protein 4e-44 50