Gene Information

Name : Solca_2098 (Solca_2098)
Accession : YP_006256328.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2472521 - 2473243 bp
Length : 723 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCGGCTTTAATTTCAATTACGGATATCGGTAAGAAATATGTGATCGGTTCAGAGGTCATACATGCTTTGAACTCGGT
TACGTTAACCATTAATAAAGGAGAATTTGTGGCGTTGATGGGTCCTTCCGGATCGGGGAAATCAACGTTAATGAATATTT
TGGGCTGTTTAGATACTCCAACAAAAGGTACTTATATTTTAAATGGTACAGATGTAAGTCGCATGACTGATGATGATCTG
GCCGAAGTAAGAAATAAAGAGATCGGTTTCGTATTTCAAACCTTCAACTTATTACCTCGTTCATCTTCACTAGACAATGT
TGCACTCCCATTAGTATATGCAGGAGTTAAAAAAGAACAACGTGATGAACGGGCGCGCAAAGCTTTAGAAGGAGTGGGGT
TAGGTAATCGAGTAGACCATAAGCCTAACGAATTATCGGGTGGTCAGCGCCAAAGGGTTGCTGTAGCCAGAGCGCTGGTT
AACAATCCATCCATTATTTTAGCCGATGAGCCTACTGGTAACCTTGATACCAAAACTTCAATTGAAATAATGGGACTTAT
GGAAGAGATCCATAAAAAAGGAAATACCATTATTTTGGTAACACACGAAGAAGATATTGCTCAACATGCACATCGTATCA
TCCGTTTGCGCGATGGTTTGATTGAAGATGACTACCTGAATACCAATATCCGCAGCGCATTAAAAGAAGCAGAAATGCTT
TAA

Protein sequence : 
MSALISITDIGKKYVIGSEVIHALNSVTLTINKGEFVALMGPSGSGKSTLMNILGCLDTPTKGTYILNGTDVSRMTDDDL
AEVRNKEIGFVFQTFNLLPRSSSLDNVALPLVYAGVKKEQRDERARKALEGVGLGNRVDHKPNELSGGQRQRVAVARALV
NNPSIILADEPTGNLDTKTSIEIMGLMEEIHKKGNTIILVTHEEDIAQHAHRIIRLRDGLIEDDYLNTNIRSALKEAEML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Solca_2098 YP_006256328.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 5e-59 57
Solca_2098 YP_006256328.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-49 49
Solca_2098 YP_006256328.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 9e-43 46
Solca_2098 YP_006256328.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 4e-45 45