Gene Information

Name : lysS (BP1026B_I1049)
Accession : YP_006274097.1
Strain :
Genome accession: NC_017831
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1127251 - 1128777 bp
Length : 1527 bp
Strand : -
Note : -

DNA sequence :
ATGACCGAACCGACCCAACCGCAGGCCGCTGTCGCAGCGGACGAAAACCAGATCGTCGCGGAGCGCCGCGACAAGCTGCG
CGCGCTGCGCGACCAAGGCATCGCCTATCCGAACGACTTCCAGCCGACGCACCACGCGGCCGGTCTGCAGACCGAATACG
CGGACGCCGACAAGGAAGCGCTCGACGCGAAGGCGCTCGACGTCGCGGTCGCCGGCCGGATGATGCTCAAGCGCGTGATG
GGCAAGGCGAGCTTCGCGACGGTGCAGGACGGTTCGGGTCAAATCCAGTTCTTCGTGACGCCCGCCGATGTCGGCGCCGA
AACGTACGACGCGTTCAAGAAGTGGGACCTGGGCGACATCGTCGCCGCGCGCGGCGTGCTGTTTCGCACGAACAAGGGCG
AGCTGTCGGTGAAGTGCACGGAGCTGCGGCTGCTCGCGAAGGCGCTGCGTCCGCTGCCCGACAAGTTCCACGGCCTCGCC
GACCAGGAAACGCGCTATCGCCAGCGCTACGTCGATCTGATCGTCACGCCCGAGACGCGCGCGACGTTCCGCGCGCGCAC
GAAGGCGATCGCGTCGATCCGCAAGTTCATGAGCGACGCCGATTTCATGGAAGTCGAGACGCCGATGCTGCACCCGATCC
CGGGCGGCGCGGCCGCGAAGCCGTTCGTCACGCATCACAATGCGCTCGACATGCAAATGTTCCTGCGCATCGCGCCCGAG
CTTTACCTGAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTGTTCGAGATCAACCGCAACTTCCGGAACGAAGGCGTGTC
GCCGCGCCACAATCCGGAATTCACGATGATGGAGTTCTACGCCGCGTACACCGATTACCGCTGGCTGATGGACTTCACCG
AGCGGCTGATCCGCCAGGCGGCCGTCGACGCGCTCGGCACCGCGACGATCCGGTACCAGGGCCGCGAGCTCGATCTCGCC
AAGCCGTTCCATCGCCTGACGATCACGCAGGCGATCCAGAAATACGCACCGAACTACACGGACGGTCAGTTGTCGGACGA
CGCGTTCCTGCGCGGCGAACTCAAGCGCCTGGGCGTCGACGTCACGCAGCCGGCGTTCCTGAACGCCGGCATCGGCGCGC
TGCAGCTCGCGCTCTTCGAGGAAACCGCCGAAGCGCAGCTGTGGGAACCGACCTTCATCATCGACTACCCGATCGAGGTG
TCGCCGCTCGCGCGCGAATCGGACACGGTGGCGGGCATCACCGAGCGCTTCGAGCTGTTCGTCACCGGCCGCGAAATCGC
GAACGGCTTCTCGGAACTGAACGACCCCGAAGACCAGGCCGCGCGCTTCAGGAAGCAGGTCGAGCAGAAGGACGCGGGCG
ACGAAGAGGCGATGTTCTTCGACGCCGACTACATCCGCGCGCTCGAATACGGAATGCCGCCGACAGGCGGCTGCGGGATC
GGCATCGACCGGCTCGTGATGCTGCTGACCGACAGCCCGACGATTCGCGACGTGCTGCTGTTCCCGCACCTGCGCCGCGA
AGACTGA

Protein sequence :
MTEPTQPQAAVAADENQIVAERRDKLRALRDQGIAYPNDFQPTHHAAGLQTEYADADKEALDAKALDVAVAGRMMLKRVM
GKASFATVQDGSGQIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFRTNKGELSVKCTELRLLAKALRPLPDKFHGLA
DQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPE
LYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLA
KPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNAGIGALQLALFEETAEAQLWEPTFIIDYPIEV
SPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGI
GIDRLVMLLTDSPTIRDVLLFPHLRRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 5e-126 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_006274097.1 lysyl-tRNA synthetase VFG1668 Protein 3e-126 55