Gene Information

Name : tssB-5 (BP1026B_II1590)
Accession : YP_006278225.1
Strain :
Genome accession: NC_017832
Putative virulence/resistance : Virulence
Product : type VI secretion system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2010297 - 2010791 bp
Length : 495 bp
Strand : +
Note : -

DNA sequence : 
ATGACAACGAACGGATCCGTCGCACCCAAAGAGCGGGTCAACATCGTCTATCGCCCGGCGACGGGCGACGCGCAGGCGGA
GGTCGAGCTGCCGCTCAAGGTGCTCGTGCTCGGCGAGTTCTCGACGGCCGCCGACAAGCCGCCGCTCGAGGAGCTCTCGC
CCGTGAACGTCGACAAGGACGACTTCAACGACGTGATGAGGGCGCAGAACCTCCAGCTCACGCTCAGCGTGCCGAACCTG
CTGGACGATCAGGCCGGCGAGGACGACCGGCTGTCCGTCACGCTCGGCTTCGATTCGGTGCACGATTTCTCGCCCGACGC
GATCGTCGAGAAAGTGCCCGAGCTCAAGCAGCTGATCGCGCTGCGCGACGCGCTGAAAGCGCTGAAGAGCCCGATCGGCA
ACATTCCCGGCTTTCGCAGGCGCATCCAGGAGATCGTCGCCGACAAGGGCGCGCGCAAGCAGTTGCTCGACGAACTCGGC
CTCGACGAACAATGA

Protein sequence : 
MTTNGSVAPKERVNIVYRPATGDAQAEVELPLKVLVLGEFSTAADKPPLEELSPVNVDKDDFNDVMRAQNLQLTLSVPNL
LDDQAGEDDRLSVTLGFDSVHDFSPDAIVEKVPELKQLIALRDALKALKSPIGNIPGFRRRIQEIVADKGARKQLLDELG
LDEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 8e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tssB-5 YP_006278225.1 type VI secretion system VFG2474 Protein 6e-72 100
tssB-5 YP_006278225.1 type VI secretion system VFG2092 Protein 9e-41 56