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Name : tssC-5 (BP1026B_II1588) Accession : YP_006278226.1 Strain : Genome accession: NC_017832 Putative virulence/resistance : Virulence Product : type VI secretion system Function : - COG functional category : - COG ID : - EC number : - Position : 2010815 - 2012314 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGGAAGGCGAACACCTGCAATCCCCGAAGCACGACGACGCGCCGGACGCGACGCCGCCCGAGTCCCCCGCCTCGCTGCT CGACGAGCTGATCGAGGCCGCGCGCGTGAAGCGCGACGAAGACGCATACCCGATCACGCGCCACGGCATCCAGGCGTTCG TCGCGCATCTGGCGAAGCCCAAGCGCCCGATCGAGACCGTGAGCCAGGCGACGATCGACGACATGATCGCCGAGATCGAC CGCAAGCTGTGCCGGCAGATCGACGCGATCCTCCATGACCCGGCATTCCAGCAACTCGAATCGACGTGGCGCTCGCTGAA GTTTCTCGTCGATCGAACGGATTTCCGCGAGAACGTGAAGGTTCAGATTCTCGACGTCGGCAAAACGGCGCTGTTCGACG ACTTCGAGGATTCGCCCGACATCACGAAATCCGGGCTGTACCAGAAGGTTTATACGGCCGAGTACGGCCAATTCGGCGGC CAGCCGATCGGCGCGATCGTCGCGAACTACACGTTCGGGCCCGGCGCGCAGGACGTCAAGCTGCTGCAGTACGTCGCGAG CACGTCGGCGATGGCGCATACGCCGTTCATCGCGGCGGCGGGCCCCGCGTTCTTCGGCATCGATTCGTTCGGCAAGCTGC CGAACGTGAAGGATCTCGCCTCGCTGTTCGAGGGGCCGCAATACGCGAAATGGAATGCGTTTCGCGAAAGCGAGGACGCG CGCTACGTCGGCCTCACGCTGCCGCGCTTCTTGCTGCGGCTGCCTTACGGCGCGAACACGACGCCCGTCAAGCGCTTCAA CTACGAGGAGCGCGTCGACGGCGGCGACGCGCATTTTCTGTGGGGCAACGCGGCGTTCGCGTTCGCGACGCGCCTCACCG CGAGCTTCGCAGACTATCGCTGGTGCGCGAACGTGATCGGGCCGAAAGGCGGCGGAACGGTGACCGATCTGCCGCTCTAC GCGTACGAATCGATGGGCGAGATCCAGAACAAGATCCCGACCGACGTGCTGATTTCCGAGCGCCGCGAGTTCGAGCTCGC CGAACAGGGCTTCATCGCGCTGACGATGCGCAAGAACAGCGACAACGCCGCCTTTTTCTCCGCGAACTCCACGCAGAAGC CGAAGTTCTTCGGCATCAGCAAGGAAGGCAAGGAGGCCGAGCTCAACTACCGGCTCAGCACGCAACTGCCGTACATCTTC GTCGTCAACCGGCTCGCCCATTACATCAAGGTGATCCAGCGGGAAAACATCGGCTCGTGGAAGGAGCGCGGCGATCTCGA GCAGGAGCTCAACCAGTGGATCCGCCAGTACGTCGTCGACATGGACAACCCGTCGCAGAGCGTGCGCAGCCGCCGCCCGC TGCGGCAGGCGCAGATCGTCGTGTCGGACGTCGAGGGCGAACCCGGCTGGTATCGCGTGGACATGAAGGTGCGGCCGCAC TTCAAGTACATGGGCGCGTTCTTCACGCTGTCGCTCGTCGGCAAGCTCGAAAAGCGCTAG Protein sequence : MEGEHLQSPKHDDAPDATPPESPASLLDELIEAARVKRDEDAYPITRHGIQAFVAHLAKPKRPIETVSQATIDDMIAEID RKLCRQIDAILHDPAFQQLESTWRSLKFLVDRTDFRENVKVQILDVGKTALFDDFEDSPDITKSGLYQKVYTAEYGQFGG QPIGAIVANYTFGPGAQDVKLLQYVASTSAMAHTPFIAAAGPAFFGIDSFGKLPNVKDLASLFEGPQYAKWNAFRESEDA RYVGLTLPRFLLRLPYGANTTPVKRFNYEERVDGGDAHFLWGNAAFAFATRLTASFADYRWCANVIGPKGGGTVTDLPLY AYESMGEIQNKIPTDVLISERREFELAEQGFIALTMRKNSDNAAFFSANSTQKPKFFGISKEGKEAELNYRLSTQLPYIF VVNRLAHYIKVIQRENIGSWKERGDLEQELNQWIRQYVVDMDNPSQSVRSRRPLRQAQIVVSDVEGEPGWYRVDMKVRPH FKYMGAFFTLSLVGKLEKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-148 | 58 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 1e-148 | 58 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 2e-146 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssC-5 | YP_006278226.1 | type VI secretion system | VFG2475 | Protein | 0.0 | 100 |
| tssC-5 | YP_006278226.1 | type VI secretion system | VFG2093 | Protein | 7e-158 | 62 |
| tssC-5 | YP_006278226.1 | type VI secretion system | VFG2070 | Protein | 7e-82 | 41 |
