Gene Information

Name : tssL-3 (BP1026B_II0189)
Accession : YP_006276868.1
Strain :
Genome accession: NC_017832
Putative virulence/resistance : Unknown
Product : type VI secretion system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 225257 - 226537 bp
Length : 1281 bp
Strand : -
Note : -

DNA sequence :
GTGACCTCAGAAACCGTGCATCATCCGGACATATCGGCTCCGGCCCCGACCTTCGATTCCGTCGCGGCGACGTTCGCGCG
GCGCGAGCCGGCGCCTGCGCCGGCCGGCGAGCCGCCCGCCGCGCGCCTCGCCGCGATCAGGCTCGCCCGCAACCCGCTGC
TCGAAGCCGCGCGCGTGCTGCTGCGGGCGCTCGCCGACATGCCCGAGCGGCTCGATCGCGACGACATTCCGCAATTGCGA
CTGCTGCTGGAACAGGAGGTGCGCCTGTTCCAGCGGCTCTGCGAACAGGCGAACATCCGGCGCGACCACATGCTCGGCGC
GCGCTACTGCCTGTGCACCGCGCTCGACGAGGCGGCGATGCAGACGTCGTGGGCACAATCGGCGAGCGGCAATCTCGGCA
CGTGGATCAGCGAGGGGCTCGCGACGTCGTTCCACGAGGATCGCCAGGGCGGAGACAAGGTCTATCTGCTGATCGGCCGG
CTGATGAATTCGCCGCACGAGCACATCGACCTGCTCGAAGTCATCTATCGAATCTTGAGCCTCGGCTTCGAGGGCCGCTA
CCGTTACGAAGCCGACGGCCAGCGCAAGCACGAGACCGTGCGCCAGCGGCTCTACAACGAGATCGCATCGCAGCGCGGGC
CGGTGTCGGTCGCGCTGTCGCCGCACTGGCAGCCCGGCCCCCGCAACAGGAGCGCGCCGTTTCGCGATTTCCCCGCGTGG
GTCACGGCCGCCGTGCTGTCGCTGATCGCGCTCGGGCTGTTCGGCTGCTTCAAGTACGCGCTGTCGACGCGCAGCGCCGA
CGTGCAGCAGCGGATCGCCGCGATCGCGCGGATGGCGCCGCCCGCCGCGCCGGCCGAGCTGCGCCTCGCGACGCTGCTCG
CCGGCGAGATCGCGGCAGGCACGCTCAGCGTCGAGGAAAACGCGCGCCGCAGCTCGGTGACGTTCCGCGGCGACGCGATG
TTCGCGCCGGGCGCGGCCGGCGTGAACCCGGCGATGGGGCCGCTCATCCGGAAAATCGCGGCCGAGATCGCGAGGGTGCC
GGGCAAGGTGACGGTGCGCGGCTACACCGACAATCAGCCGATCAAAAGCCGCCAGTTCGCGTCGAACGAGGCGCTATCCG
AAGAGCGCGCGACGCAGGTCATGCAGATGCTCCAGAGCGCGGGCGTGCCCGCGAGCCGCCTCGAGGCGCTCGGCAAGGGC
GGCGCCGAGCCGATCGGCGACAACCGGACCCCGCAGGGCCGCGCGCTGAACCGCCGCGTCGAAATCACGGTCGCGCGCTG
A

Protein sequence :
MTSETVHHPDISAPAPTFDSVAATFARREPAPAPAGEPPAARLAAIRLARNPLLEAARVLLRALADMPERLDRDDIPQLR
LLLEQEVRLFQRLCEQANIRRDHMLGARYCLCTALDEAAMQTSWAQSASGNLGTWISEGLATSFHEDRQGGDKVYLLIGR
LMNSPHEHIDLLEVIYRILSLGFEGRYRYEADGQRKHETVRQRLYNEIASQRGPVSVALSPHWQPGPRNRSAPFRDFPAW
VTAAVLSLIALGLFGCFKYALSTRSADVQQRIAAIARMAPPAAPAELRLATLLAGEIAAGTLSVEENARRSSVTFRGDAM
FAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTDNQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKG
GAEPIGDNRTPQGRALNRRVEITVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0305 NP_454885.1 putative membrane protein Not tested SPI-6 Protein 2e-67 48