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Name : tssC-6 (BP1026B_II2260) Accession : YP_006278868.1 Strain : Genome accession: NC_017832 Putative virulence/resistance : Virulence Product : type VI secretion system Function : - COG functional category : - COG ID : - EC number : - Position : 2805142 - 2806650 bp Length : 1509 bp Strand : - Note : - DNA sequence : ATGAATGAACGTGCCCAAACCCAGGCCGACACGCGCGCCGCCGCCCAGCCCGTGGTCGCGCGCGACGAGTTCGCCGCGCT GCTGCAAAAGGAGTTCAAGCCGAAGACGGCGGAGGCGCGCGAATCGGTCGAGCGCGCGGTGCGCACGCTCGCGCAGCAGG CGCTCGAGCACACGGTCGGCATGACGACCGACGCTTACGGCAGCGTCAAGCAGATCATCGCCGAGATCGACCGCAAGCTC TCCGAGCAGATCAACCTGATCCTGCATCATCAGGAGTTCCAGACGCTCGAAGGCGCGTGGCGCGGCCTGCACTACCTCGT CACGAACACCGAGACCGACGAGCTGCTGAAGATCAAGGCACTGCCCGCGTCGCGCAACGAGCTCGCGCGCACGCTCAAGC GCTACAAGGGCGTCGCGTGGGATCAGAGCCCGCTGTTTCGCAAGGTCTACGAAGAAGAGTACGGCCAGTTCGGCGGCGAG CCGTTCGGCTGCCTCGTCGGCGATTTCCATTTCAACCACAGTCCGCCCGACGTCGAGATGCTCGGCGAGCTGTCGAAGAT CGCGGCAGCCGCGCATGCGCCGTTCATCGCGGGCGCGTCGCCCGAGCTGATGCAGATGGATTCGTGGCAGGAGCTCGCCA ATCCGCGTGATCTGACGAAGATCTTCCAGAACACCGAATACGCCGCGTGGCGCAGCCTGCGCCAGTCCGAGGATTCGCGC TACGTCGGGCTCGCGATGCCGCGCTTTCTCGCGCGGCTGCCGTACGGCGCGCGCACGAATCCCGTCGACGAATTCGACTT CGAGGAGGATACCGGCGCCGCGAGCCACGACCGCTACACGTGGGCGAATTCCGCGTACGCGATGGCGGCGAACATCAACC GCTCGTTCAAGCTGTACGGCTGGTGCTCGTCGATCCGCGGCGTCGAATCGGGCGGCGCGGTGCAAGGGCTGCCGTGCCAC ACGTTCCCCACCGACGACGGCGGCGTCGACCAGAAATGCCCGACCGAGATCGCGATCAGCGACCGCCGCGAGGCCGAGCT CGCGAAGAACGGCTTCATGCCGTTCGTACATCGAAAGAATTCGGATTTCGCGGCGTTCATCGGCGCGCAGTCGCTGTATC AGCCCGCCGAGTATCACGATCCCGACGCGACCGCGAACGCGCGGCTCTCGGGCCGCCTGCCGTACCTGTTCGCGTGCTGC CGCTTCGCGCATTACCTGAAGTGCATCGTGCGCGACAAGATCGGCTCGTTTCGCGAGCGCGACGACATGGAGCGCTGGCT CAACGACTGGATCATGAACTACGTCGACGGCGATCCGGCGAACTCGTCGCAGGAGACGAAGGCGCGCAAGCCGCTCGCGG CCGCGCAGGTCGTCGTCGAGGAGATCGACGACAACCCCGGCTATTACGCGTCGAAATTCTTCCTGCGGCCGCATTACCAG CTGGAAGGGCTCACCGTGTCGCTGCGGCTCATCTCGAAGCTGCCGTCGGCGAAGGCGGCGGGCGAATGA Protein sequence : MNERAQTQADTRAAAQPVVARDEFAALLQKEFKPKTAEARESVERAVRTLAQQALEHTVGMTTDAYGSVKQIIAEIDRKL SEQINLILHHQEFQTLEGAWRGLHYLVTNTETDELLKIKALPASRNELARTLKRYKGVAWDQSPLFRKVYEEEYGQFGGE PFGCLVGDFHFNHSPPDVEMLGELSKIAAAAHAPFIAGASPELMQMDSWQELANPRDLTKIFQNTEYAAWRSLRQSEDSR YVGLAMPRFLARLPYGARTNPVDEFDFEEDTGAASHDRYTWANSAYAMAANINRSFKLYGWCSSIRGVESGGAVQGLPCH TFPTDDGGVDQKCPTEIAISDRREAELAKNGFMPFVHRKNSDFAAFIGAQSLYQPAEYHDPDATANARLSGRLPYLFACC RFAHYLKCIVRDKIGSFRERDDMERWLNDWIMNYVDGDPANSSQETKARKPLAAAQVVVEEIDDNPGYYASKFFLRPHYQ LEGLTVSLRLISKLPSAKAAGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 1e-79 | 41 |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssC-6 | YP_006278868.1 | type VI secretion system | VFG2070 | Protein | 7e-179 | 75 |
| tssC-6 | YP_006278868.1 | type VI secretion system | VFG2475 | Protein | 3e-83 | 43 |
| tssC-6 | YP_006278868.1 | type VI secretion system | VFG2093 | Protein | 2e-85 | 42 |
