Gene Information

Name : tssB-6 (BP1026B_II2261)
Accession : YP_006278869.1
Strain :
Genome accession: NC_017832
Putative virulence/resistance : Virulence
Product : type VI secretion system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2806643 - 2807221 bp
Length : 579 bp
Strand : -
Note : -

DNA sequence :
ATGACGAGCAAGTACAAGGCTTCGGCCAGCGGACAGAAATTCATCGCGCGCAACCGCGCGCCGCGCGTGCAGATCGAGTA
CGACGTCGAGACCTACGGCGCCGAGCGCAAGGTCCAACTGCCGTTCGTGATGGGCGTGATCGCGGATCTCGCGGGCAAGC
GGGCCGAGCCGCTGCCGGACTTGCCGGAGCGCAAGTTCCTCGAAATCGACGTCGACAATTTCGACGAGCGGATGAAATCG
ATCGCGCCGCGCGTCGCGTTCCAGGTGCCGAACACGCTGTCGGGAGACGGCATGCTGAGCGTCGACATGACGTTCGAGAG
CATCGACGATTTCTCGCCCGCCGCGATCGCGCGCAACGTCGACGCGTTGCGGCGCCTGCTCGACGCGCGCACCGAGCTGT
CGAACCTGCTGTCGTACATGGACGGCAAGCACGGCGCCGAGCAACTGATCGAAAACGCGATCAACGATCCGGCACTGCTG
GCCTCGCTCGTGCGGCAGCCGCTCGCGGCGGACGCCGAAGGCGGCGCGCGGCAGCCCGTGACCGGCACCGAAGACGACCC
GGAGATTCGCCATGAATGA

Protein sequence :
MTSKYKASASGQKFIARNRAPRVQIEYDVETYGAERKVQLPFVMGVIADLAGKRAEPLPDLPERKFLEIDVDNFDERMKS
IAPRVAFQVPNTLSGDGMLSVDMTFESIDDFSPAAIARNVDALRRLLDARTELSNLLSYMDGKHGAEQLIENAINDPALL
ASLVRQPLAADAEGGARQPVTGTEDDPEIRHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-54 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tssB-6 YP_006278869.1 type VI secretion system VFG2069 Protein 9e-57 70