Gene Information

Name : tssB-4 (BP1026B_II0573)
Accession : YP_006277234.1
Strain :
Genome accession: NC_017832
Putative virulence/resistance : Virulence
Product : type VI secretion system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 707872 - 708420 bp
Length : 549 bp
Strand : +
Note : -

DNA sequence :
ATGGTTCGACAAAAGGATGGACAGAAATTCATCGGGGAGAGTCGTGCGCCCCGCGTGCAGATTGAATACGACGTGGAGGT
GTACGGCTCGCAGAAGAAGGTCGAGCTGCCGTTCGTCGCGGGCGTGATGGCGGACCTGTCGGGCGACAACGTCGAGCCGC
TCGGCCCGGTCGAGGATCGGCGCTTTCAGGAGATCGACGTCGAGAACTTCGATGAGCGCATGGCGCAGATCGCGCCGTCG
CTGAGCTATCACGTGAAGAACGTGCTGACCAACGACGGCACGCTGATTCCGATCGATCTGACGTTCACGTCGATGGAATC
GTTCGAGCCGGCGGACGTCGTCAAGCGCATTCCCGAGCTGTCGACGCTGCTCGAGGCGCGCAACCGGCTGAAGGAGCTGC
TGACCTACATGGACGGCAAGGCGGCGGCCGAGGACGTGATCCAGGAATTGTTGAAGAGCCCGCAGTGGGCGAACGAGGCC
GACGCGGCGGAGCAATCCGGCGGCGCCGGCGAGGGTGGAGACCATCAACCGGAAGAGGGTGCGAAATGA

Protein sequence :
MVRQKDGQKFIGESRAPRVQIEYDVEVYGSQKKVELPFVAGVMADLSGDNVEPLGPVEDRRFQEIDVENFDERMAQIAPS
LSYHVKNVLTNDGTLIPIDLTFTSMESFEPADVVKRIPELSTLLEARNRLKELLTYMDGKAAAEDVIQELLKSPQWANEA
DAAEQSGGAGEGGDHQPEEGAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-41 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tssB-4 YP_006277234.1 type VI secretion system VFG2069 Protein 1e-42 54