Gene Information

Name : W5S_1152 (W5S_1152)
Accession : YP_006282125.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1262517 - 1263242 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence :
ATGTTAGACAATATTCGCATTGTTCTGGTTGAAACGTCGCACACTGGCAATATGGGGTCGGTGGCCAGAGCGATGAAAAC
CATGGGATTAAGCAAACTCTATTTGGTCAATCCACTGGTTAAGCCTGATTCGCAGGCGATTGCGCTGGCGGCCGGTGCCA
GCGATGTCATTGGTAATGCTACGATTGTTGATTCGCTCGATCAGGCGCTTGAGGGTTGTAGTCTGGTCGTTGGCACCAGT
GCGCGTTCTCGCACGTTGCCCTGGCCGATGCTGGACCCGCGTGAATGCGGCGTTCGCAGCGCACAGGAAGCGGAGCACGC
GCCAGTGGCATTGGTGTTTGGGCGTGAACGTGTCGGGCTGACGAATGATGAACTTCAAAAATGCCATTATCACGTGGCCA
TTCCCGCTAATCCGGAATACAGCTCGTTAAATCTGGCGATGGCGGTGCAGATTATTGCTTATGAAGTCCGTATCGCGCAT
TTGGATCGGTTACAGGCCGGTAAGCCGGAACATGAAGAGTCGCCGTATCCGCTGGTCGACGATCTGGAGCGCTTTTATCA
GCATCTTGAAGAGACATTGCTGCAAACCGGATTTATCCGACCAGCACATCAGGGGCAGGTGATGAACAAGCTGCGTCGCC
TGTTTACCCGCGCCAGACCTGAAGCACAGGAACTTAACATCCTGCGTGGGATACTGAGTTCGGTACAGAAAACATACGAC
GAATAA

Protein sequence :
MLDNIRIVLVETSHTGNMGSVARAMKTMGLSKLYLVNPLVKPDSQAIALAAGASDVIGNATIVDSLDQALEGCSLVVGTS
ARSRTLPWPMLDPRECGVRSAQEAEHAPVALVFGRERVGLTNDELQKCHYHVAIPANPEYSSLNLAMAVQIIAYEVRIAH
LDRLQAGKPEHEESPYPLVDDLERFYQHLEETLLQTGFIRPAHQGQVMNKLRRLFTRARPEAQELNILRGILSSVQKTYD
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 9e-65 53