|
Name : W5S_0140 (W5S_0140) Accession : YP_006281151.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : VgrG protein Function : - COG functional category : - COG ID : - EC number : - Position : 164882 - 166729 bp Length : 1848 bp Strand : + Note : - DNA sequence : ATGGCCAACAGTACAGGATTGCAGTTCACCGTAAAGGTCGGCGCCTTGCCGGCCTCGACGTTTGCGGTGGTGGATTTTCA GCTCAGCGAGGCGCTTAACCAGTCGTTTTCCCTGTCCCTCAATCTGGCCAGCGCCCTGCCGGATGTGGATTTTGGCGCGG TGCTGGACCAGCCCTGTGAGCTGCTGATTTGGTTCGAAGGCGAGTTGAAGCGACGGGTGAGCGGGATAATCAGCGGCTTT GCCCAGGGTGACACCGGCTTTCGCCGCACCCGCTATCAGGCGGAAGTGCGTCCGGCGTTGTGGCGACTCGGCTTACGCAC CAACGCCCGCATTTTTCAGGCGCAGAAGCCAGAGGCGATTATCGGCACCCTGCTGGAAGAAGCCGGGATTACCGACTACG CCTTCTCGTTACGTCATGACCATGCCCCGCGTGAATACTGCGTGCAGTACCGGGAAAGTGATTTGGCGTTTGTCACCCGA CTGGCCGCCGAGGAAGGCTTGTACTTCTTCCACGAGTTTGAGGAAGGCAAACACCGGGTGGTCTTTGCCGACGATGCCGG CGCACTGGCCAAAGGCCCTGAACTGTTCTTCAACCTCGCCACGCAGGGGCTGAGTGAAGGCGAATATGTCCACCGTTTCC GCTACGCCGAGCGGGTCAGCATCGCCGAGGTGGCGCTCAAGGACTACAGCTTCAAAACCCCGGCCTATGGCCTGCTGCAC AAGAAGATGAGCAGCGAACTGGCACACCAGCGCGAAAGCTATCAGCACTTTGACTACCCCGGACGCTTTAAAAAAGACCC GAGCGGCAAGGCGTTCAGCCGCTACCGGCTGGATGCACTGCGTGCTGGGGCCATGACCGGCGCGGGGGACTCCAACGCCG CGATGCTGATGCCGGGCAACAGTTTCATGCTCACCGAGCACCCCAACCTGCCCCTCAACACCGGCTGGCAAGTGGTTGCC ATCACCCACAGCGGACAGCAACCGCAGGCGCTGGAGGAAGAAAGCGGCGGCGAACCGACCACCTACAGCAACAGCTTCGA GGTCATCAGCGCCAAAACCACCTGGCGTGCCGACCTGCCGTACAAGCCGATGGTCGATGGCCCGCAGATTGCCACGGTGG TGGGCCCGGCCGGTGAGGAAATCTACTGTGACGAATACGGCCGCATCAAGCTGCAATTCCCGTGGGACCGCTACGGGGCG AGTGACGACCAGAGCTCCTGCTGGGTACGGGTGAGCCAGGGCTGGGCGGGCGGCCAGTACGGGCTGATAGCCATCCCGCG CATCGGCCATGAGGTGATTGTCAGCTTCCTCGAAGGCGACCCGGACCAGCCGATAGTGACCGGCAGAACCTTTCATGCCA CCAATCCGTCGCCGTACCCGCTGCCCGCCAACAAGACCCGTACCTCACTGCGGACCTCAACGCACAAGGGAGCCGGGTTC AACGAGCTGCGCTTTGAAGACCAGGCCGGGCAGGAGGAGGTATTTATCCATGCCCAGAAGGACATGAACACCGTGGTGCT CAATAACCGCAGCACCACCGTGACCGCTGACCATACCGAAAGCGTCGGCGGCAATCAGACGGTGTCGGTGGAGAAAGACC AGCACACTGAAATTCAGGGGGAGCAGGCTATCGCCATTATTGGCAGTCGCAGCACCGTCATCGGTAAAGACGGCAAGGGA AAGTCGCACGACTCCCTGCAGGTGAAAAACAATATCGCCATCCAGTCACAAAAGGGCGACATCCTGATAGCGACCAACGG CGGTTTTATCGGCATCAGTGCCGAAGGTGACATCACCATCAAAGGCAAAACCATTACCGTCAACGGCAGCCGTATTGACC TGAACTGA Protein sequence : MANSTGLQFTVKVGALPASTFAVVDFQLSEALNQSFSLSLNLASALPDVDFGAVLDQPCELLIWFEGELKRRVSGIISGF AQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQAQKPEAIIGTLLEEAGITDYAFSLRHDHAPREYCVQYRESDLAFVTR LAAEEGLYFFHEFEEGKHRVVFADDAGALAKGPELFFNLATQGLSEGEYVHRFRYAERVSIAEVALKDYSFKTPAYGLLH KKMSSELAHQRESYQHFDYPGRFKKDPSGKAFSRYRLDALRAGAMTGAGDSNAAMLMPGNSFMLTEHPNLPLNTGWQVVA ITHSGQQPQALEEESGGEPTTYSNSFEVISAKTTWRADLPYKPMVDGPQIATVVGPAGEEIYCDEYGRIKLQFPWDRYGA SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTTVTADHTESVGGNQTVSVEKDQHTEIQGEQAIAIIGSRSTVIGKDGKG KSHDSLQVKNNIAIQSQKGDILIATNGGFIGISAEGDITIKGKTITVNGSRIDLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 1e-155 | 53 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 4e-124 | 43 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 3e-124 | 43 |
