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Name : W5S_0142 (W5S_0142) Accession : YP_006281153.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : YD repeat protein Function : - COG functional category : - COG ID : - EC number : - Position : 167185 - 171471 bp Length : 4287 bp Strand : + Note : - DNA sequence : ATGCTTGATGACATCCTCTCGCGCATTGCGCGGGTTGGCGCGATGCATGCGGGGAATCGCCCCACCCTGCCACCCGATTT GCCTGAACCGGGGCAGGGTAAACCGCCGACCTCACCGGGCAAGCCTATCAAACACAGCAGCTTTCTGGGGGCGTTGCTCG GTGCGGTGGCCGGGGCACTCGTGGCCGCCGCCGTCGCGGCGGTGGCCGTTGCCCTGGTGGGCGTCACTGGCGGGCTGGCC ATTGCTCTGGTTGGTGGGCTGGCGGCACTGGGTGCAGGGAGTCTGATATCTGCCGTCAGTGGTCGGGTGTCGGCCATGGT CGACAGCGCTTCGCCGCCATCAGGGCAGGTTGATGGCGGTTCGAAGACCGTTTTTGTTGAAGGCAATCCGGTCTCCCGTG CGGAAATCGATGCGGTGAAGTGCGCTAAACACAATGGTCCGCAACTGATTGCGCAGGGCAGTGAAACGGTGTTTGTCGAG GGATACTATGCCGCACGGGTGGACGACAAGGCCGTGTGCGGTGCGACCATCAAGGAAGGGGCCTCGACGGTGTTCTTTGG CTCCGGGCAGGCCTCGCCCCTCAAGGTGCAGGAGGAGTTCAGCGGCTGGCAGAAAGCGTTACTGATTGCGGTGGAGTTTC TGGTGCCGCCGAGCAAGGGACTATTCAGAGGATTGGGCCGGTTATTTACCGGAAAAGGGCTTGTCGGGGTACTCCGGGGG GCTAAAGCGGCGGCTAAATATCTAGCCCGGGTACCCGGAAAAACCCGCTGTGCGGCAACGGCATTTATTCACAGCAAAGG ACTGGCCCGCTTTTCTCATGCCAAAGCGGCCTTCAAAGCCGACCCGGTCTACATCGCCAGCGGCGAGGTGATTGAAAGCC GTACCGATATCGAACTGGGGCAGACCATTCCTCTGGTATTTGAGCGCACCTATCGCTCCGGTAGCCCTCACACCGGCCTG CTGGGACAGGGCTGGCACGATAGCTGGAGTGAAGTGGCCACCGTTGACCGCACCGACAAGGGTGACATCCAGGTGACGCT CACGCTGGCGCAGGGTTACGACATCGACTTCACCTTCGGGATAGGGGCAACGGTGGTGTACTGCGCCGAATACCCCGAAT TCAAACTGGTGAAACGCCATAGCGGCTTTCATCTGTGGCACCGCGACAGCCAGACCTGGCGGGCGTTTACCGTCAAACAA GATAACCGACTGCTGCTGTCGGCGATAACCGACAACCACCATAACCGCATTGACTTTCTGCGCGACCCCAAAGGCTACCT GCGCAAGATTAGGCACGGCGACGGCATCGAGCTGCTGCTGGTGTGGCAGGGAGAATTTCTCAGCCAGATACAGCGTATCG ACGGCGGGCAAAAAACCGTGCTGGCCGAATACCGGCAGGATGAACGGGGGCGACTGGTTGAGGCCGATGCGGCCCATGCC TATCACCTGTTCTACGACTACGACAGCCATCACCGCCTGACGCGCTGGCACGATAACGACCAGACCTGGGCGCGGTATGA ATACGACCATCAGGGACGCTGTATCTACACCACCTGTGCCGATGGCTACCTGACGGCGAATTTCGAGTACCTGGCTGACC GCGTGGTGATGATTGACGGGCTGGGACAGCGCCATGAATACGGCTTCAACGACCTGTACCTGATGGCGTGGGAAAAATCT CCGCTCGGCCATCTCACCCGCTATGAGTATGACGATGTGGGCAACCTGCTGCGGGAAATTTCCCCGGCGGGTCGGGCAGT GGAATTTGCCTATCTGGGCGACAGCGGGCTGGTCAGCACCTTTACCGACGGCAGCGGCCACGCGTGGCACTACGCCTATG ACGACCACGAGCGACTTATCGGTATTACCGACCCGCTGGGGCGCCGTTGGGTCTGGCAGTACGACAATAACGGCAACCCG CTGAGTCTGACCGGGCCGGATGCGAGCGAAATGCGGTTTGCCTGGAACCGCTACGGCCTGCTGACCGAAGTGAGCGACCA GAATGGACACGTGCAGGCCAGCCTGTTTTACGACCACCGTCAGCGCCTGTTGAGCGCCACCGATGCGGAAGCCCGCACTC AGCAACTGCGCTACGACCAGCAGGACAGACTGACCACCTGGACACGCCCGGATGGTGCCACCTATCGGCTGGGTTATCGC CGGGCAAGCTGGCGACTGCCGGAGCAACTGATACGCCCGGACGAGAAAGAGGAAAAACGCCAGTACGACAAGCATAACAA CCTGCTGAACTACACCGACGGCAACGGTGCGGTCTGGCAGCAAACCTACGGCCCGTTCGACCTGCTGACTTCACGCACCG ACGCTGAAGGCCGCACCTGGCAGTACGACTATGATAAAGACAGTCAGCAACTGATTGGTGTCACCGCCCCGGATGGCAAC CGCTGGCAGTGGTGGCTGGATGCGGACGGACGGGTTATCCGTGAGCGGGACATGGCCGGTACGGAAACCCACTACGGCTA TGACGAAGACGGGCACTGCATCAGCGTGCGCAATGGCGAAGGGGAAATCCGCCACTTTCTGTACGACGGGCGCGGCCTGC TTATCAAAGAAACCGCGCCGGACGATACGCTGTATTACCGCTATGATGCGGCCGGTCGACTGACCGACGTGACATCGACC ACCAGTCATGTCCAGCTTGAATATGACGAGCGTGACCGGGTGGTACAGGAGCATAACAGCGGCACGGCAATCCGACGCCA CTATCAGGACGCATCGCACACCGTTACCCGCAGCCTGCACTGGGAAGGCGAAGAGGACAGCGCGGCACTGACCAGCACCT TCTGCTACCGCGCCACGGGCGAACTGCATCAGGTGCAGTTGCCGGATGGCGCCGAGCTGACACTGACTCACGATGCGGCT GGGCGGGAAGCCATCCGCCACAGCCCGGGCGGTTTTATACAGCGGCGTGAATACGACACGATGGGCTGGCTGACGCGGGA GATGAGCGGGCAGACGGTTGACGGTCGCCTGCAGCCGGTACAGACGCGGGAATACCTCTACGACAGCGCGGGTAACCTGA CGGGCACCCGGCGCAACCGTGAGGCTGCAGGTTACCGACTGGATGCCAGCGGACGGGTGCTGTCGGTACTGAGCGGTGGT GCGGGGCGCACCGTCAACACCGAAGAGGAATACCGCTACACCCGCAGCGGGCTGCCGCAGGATGCGACAAGGCTGACCGA CTGGCAGGCCGGACGCCTGACCCAGCAGGACAACACTCACTATCAGTACGACAAGGCCGGGCGACTCATTCGCCGGCAGG TGGTGCAACCGGGCTATCGGCCACAGGTGTGGCACTACCGCTGGGACAGCCGCAATCAGCTCAGAGTAGTGGACACCCCA AACGGTGAACGCTGGCTCTACCGCTACGACCCGTTCGGACGGCGCATCGGCAAACGCTGCGACCAGACAGCCGAAGCTAT CCGTTATCTGTGGGACGGTGACCAGATAGCGGAGGTGCGGCACTATCGCGACAATCAACTTGTCTCACGGCGCCACTGGG TGCACAACGGCTGGGAACTGCTGGTGCAGCAGCGTCAGAACGCCGACGAAAGCTGGGAAACGGACTTTGTCACCAGCGGC CATAACGGTGAACCGCAGGCTATTTTCAACCAGACCGGTGAACTGCGCTGGCAGGCCCCCCGCGCTAACTTATGGGGCCA GCGCTATACGGAAAACGCTGAAAAATATGATCCGGGGCTGGCGTTTGCCGGACAATACCGTGACGACGAAAGTGGCTTAT GCTATAACCGTTTCAGGTATTATGACCCGAACGGCGGTTGTTATATCTCGCCTGACCCTATAGGGGTGTTGGGTGGGGAA AGTAATTACGGGTATGTTCATAATCCTGTAAGTTGGATCGATCCGAAAGGGTTAGCTGGATGTAATATAGTCCATAGGGC GGTGACTCCTGAACAAGCAGCAAGTATCCGGGCAGGCAATGGAATATCAAGGCCGACTCCATATCATAGAACGACACCGA CTCAGCATGTAGCAGGAGCACCGCACTCGCGTGATCCGTGGATATCAACAACTAGAAGTCAATCAACGGCAGAATACTTC GCCACTCATGGTGGAACCCAAGCAGCAAATCCAATTGTTAAGATAGATCTGTCTAAAATTCCGAGCGATAAGATTTTAGA TGTATCAAACGCTCAAAAGGCTGCGGAACATTTGCAGACTCCATTCACCCGAAATGTAGCAGCAGCCCACCAAGAGGTAT TAATCTTTGGAGAAATACCATCGGAAGCGATAATTGGATTTTTATAG Protein sequence : MLDDILSRIARVGAMHAGNRPTLPPDLPEPGQGKPPTSPGKPIKHSSFLGALLGAVAGALVAAAVAAVAVALVGVTGGLA IALVGGLAALGAGSLISAVSGRVSAMVDSASPPSGQVDGGSKTVFVEGNPVSRAEIDAVKCAKHNGPQLIAQGSETVFVE GYYAARVDDKAVCGATIKEGASTVFFGSGQASPLKVQEEFSGWQKALLIAVEFLVPPSKGLFRGLGRLFTGKGLVGVLRG AKAAAKYLARVPGKTRCAATAFIHSKGLARFSHAKAAFKADPVYIASGEVIESRTDIELGQTIPLVFERTYRSGSPHTGL LGQGWHDSWSEVATVDRTDKGDIQVTLTLAQGYDIDFTFGIGATVVYCAEYPEFKLVKRHSGFHLWHRDSQTWRAFTVKQ DNRLLLSAITDNHHNRIDFLRDPKGYLRKIRHGDGIELLLVWQGEFLSQIQRIDGGQKTVLAEYRQDERGRLVEADAAHA YHLFYDYDSHHRLTRWHDNDQTWARYEYDHQGRCIYTTCADGYLTANFEYLADRVVMIDGLGQRHEYGFNDLYLMAWEKS PLGHLTRYEYDDVGNLLREISPAGRAVEFAYLGDSGLVSTFTDGSGHAWHYAYDDHERLIGITDPLGRRWVWQYDNNGNP LSLTGPDASEMRFAWNRYGLLTEVSDQNGHVQASLFYDHRQRLLSATDAEARTQQLRYDQQDRLTTWTRPDGATYRLGYR RASWRLPEQLIRPDEKEEKRQYDKHNNLLNYTDGNGAVWQQTYGPFDLLTSRTDAEGRTWQYDYDKDSQQLIGVTAPDGN RWQWWLDADGRVIRERDMAGTETHYGYDEDGHCISVRNGEGEIRHFLYDGRGLLIKETAPDDTLYYRYDAAGRLTDVTST TSHVQLEYDERDRVVQEHNSGTAIRRHYQDASHTVTRSLHWEGEEDSAALTSTFCYRATGELHQVQLPDGAELTLTHDAA GREAIRHSPGGFIQRREYDTMGWLTREMSGQTVDGRLQPVQTREYLYDSAGNLTGTRRNREAAGYRLDASGRVLSVLSGG AGRTVNTEEEYRYTRSGLPQDATRLTDWQAGRLTQQDNTHYQYDKAGRLIRRQVVQPGYRPQVWHYRWDSRNQLRVVDTP NGERWLYRYDPFGRRIGKRCDQTAEAIRYLWDGDQIAEVRHYRDNQLVSRRHWVHNGWELLVQQRQNADESWETDFVTSG HNGEPQAIFNQTGELRWQAPRANLWGQRYTENAEKYDPGLAFAGQYRDDESGLCYNRFRYYDPNGGCYISPDPIGVLGGE SNYGYVHNPVSWIDPKGLAGCNIVHRAVTPEQAASIRAGNGISRPTPYHRTTPTQHVAGAPHSRDPWISTTRSQSTAEYF ATHGGTQAANPIVKIDLSKIPSDKILDVSNAQKAAEHLQTPFTRNVAAAHQEVLIFGEIPSEAIIGFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rhs-core | AAN64198.1 | Rhs | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 42 |
