Gene Information

Name : W5S_1468 (W5S_1468)
Accession : YP_006282434.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : VgrG protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1611045 - 1612895 bp
Length : 1851 bp
Strand : +
Note : -

DNA sequence :
GTGGCAAACAGTACAGGATTACAGTTCACGGTAAAGGTCGGTGCATTGCCCGAGAGCACCTTTGCGGTGGTGGATTTTCA
GCTCAGCGAGGCACTGAACCAGCCGTTTTCCCTGTCGCTGAATCTGGCCAGCCCGGTGCCGGGTATCGACTTTGGTGCCG
TGCTGGATCAGCCGTGTGAACTGCTGGTGTGGTACGAAGGTGAACTCAAGCGCCGTGTCAGCGGCATTGTCAGCGCCTTT
GCGCAGGGCGACACCGGTTTTCGCCGTACCCGCTATCAGGCAGAAGTGCGACCGGCGCTGTGGCGGCTGGGGCTGCGCAC
CAATGCACGGATCTTTCAGGCACAGAAGCCAGAAGCGATTATTGGTACGTTGCTGGAAGAGTCCGGCATCACCGACTACG
CCTTTGCGCTGCGGCACGACCACGCGCCCCGCGAATACTGTGTGCAGTACCGGGAAAGTGATTTGGCCTTTGTCGCCCGT
TTGGCGGCTGAGGAAGGCCTGTACTTTTTCCATGAGTTTGAAGCCGGTAAGCACCGGGTCGTCTTTGCCGATGACGCCGG
GGCGCTTGGCAAAGGCCCGGAACTGTTCTTCAACCTCGCCACGCAGGGGCTGAGTGAAGGCGAATATGTCCGCCGTTTCC
GCTACGCCGAAGCGGTCAGTACCGCCGAAGTCGCGCTCAAGGATTACAGCTTCAAAACCCCTGCCTACGGCCTGCTGCAC
AGCAAGATGAGCGGCGAATTGGCGAACCAACGCGAAAGCTACCAGCACTATGACTACCCCGGACGCTTTAAACAAGACCC
GAGCGGTAAGGCCTTTACCGGCTACCGGCTGGATGCGCTAAGAGCGGGGGCGATGACCGGCTCCGGTGAATCCAATGCCG
CGATGTTGATGCCGGGCAGCAGTTTTACCTTAACCGAACATCCCAACCCGACGCTGAATAGTGGCTGGCAACTGGTGGTG
ATCACCCACAGTGGGCAGCAACCGCAGGCGCTGGAAGAAGAAAGCGGCGGCGAGCCGACGACCTACAGCAACAGCTTTGA
GGTGATTAGTGCCAAAAGCACCTGGCGTGCCGATCTGCCCTACAAACCGATGGTGGATGGCCCGCAGATTGCCACCGTGG
TCGGCCCGGCAGGTGAGGAAATCTACTGCGACGAATACGGGCGCATCAAACTGCAATTCCCGTGGGATCGCTACGGAGCC
AGCGATGACCAGAGTTCCTGCTGGGTGCGCGTCAGTCAGGGCTGGGCAGGCGGTCAGTACGGCCTGATAGCCATCCCACG
CATCGGCCATGAGGTGATTGTCAGTTTTCTGGAAGGCGACCCCGACCAGCCGATTGTGACGGGTCGTACCTTCCACGCCA
CTAATCCGTCACCGTATCCACTGCCAGCGAACAAGACACGCACCTCGCTGCGTACGTCAACGCATAAGGGCGCGGGATTC
AATGAACTGCGCTTTGAAGACCAGGCCGGGCAGGAAGAGGTGTTTATCCATGCTCAGAAAGACATGAACACCGTGGTGCT
GAATAACCGCAGTACTACCGTGACGGCTGACCATACCGAAAACGTCGGTGGCAATCAGGCAGTGTCCGTCATCAAAGACC
AGTCCACTGAAATCCAGGGGCAGCAAACCATTGCCATCTCCGGTAGCCGCAGCACCGTTGTGGGCGACGCCACGGCAACG
GAAGACGTTCATGACAGCCTGCAGGTGAAAAACAACATCCTTATCCAGTCGAAACAGGGCGGCATCCTGATTGCCAACGG
CATCGGTTTTTTCAGTATCAGCGATAAAGGTGACATCACCATCAAGGGTAACACCGTCACCATCAACGGCAATCGTATCG
ATCTGAACTAA

Protein sequence :
MANSTGLQFTVKVGALPESTFAVVDFQLSEALNQPFSLSLNLASPVPGIDFGAVLDQPCELLVWYEGELKRRVSGIVSAF
AQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQAQKPEAIIGTLLEESGITDYAFALRHDHAPREYCVQYRESDLAFVAR
LAAEEGLYFFHEFEAGKHRVVFADDAGALGKGPELFFNLATQGLSEGEYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLH
SKMSGELANQRESYQHYDYPGRFKQDPSGKAFTGYRLDALRAGAMTGSGESNAAMLMPGSSFTLTEHPNPTLNSGWQLVV
ITHSGQQPQALEEESGGEPTTYSNSFEVISAKSTWRADLPYKPMVDGPQIATVVGPAGEEIYCDEYGRIKLQFPWDRYGA
SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF
NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTTVTADHTENVGGNQAVSVIKDQSTEIQGQQTIAISGSRSTVVGDATAT
EDVHDSLQVKNNILIQSKQGGILIANGIGFFSISDKGDITIKGNTVTINGNRIDLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 5e-161 53
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-129 44
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 1e-129 44