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Name : W5S_3286 (W5S_3286) Accession : YP_006284232.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : Protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 3536560 - 3538374 bp Length : 1815 bp Strand : - Note : - DNA sequence : ATGCTGGTCGTGGTGTTGTTTGTCGGCCTGCTCTATGCGCTTCCTAACCTATATGGTGAGGATCCGGCGGTACAAGTTAC TGGTGCGCGGGGAACCGCCGCCAGCGAAACGACGCTGATCCAAGTCCAGAATGTCCTGAAAGAACAAAATATTACCAGTA AGTCGATTGCATTAGAAAATGGTGCAATTCTGGCTCGCTTCTCTAACCCTGATATTCAGCTCCGTGCGCGTGAAGCGCTC GTTAATGAGCTGGGCGAAAAATTCGTCGTTGCACTTAACCTTGCTCCTGCTACGCCAACCTGGCTGCGGTTGTTAGGTGC TGAACCGATGAAATTGGGGCTTGACCTGCGCGGCGGCGTTCACTTCCTGATGGAGGTGGATATGGATACGGCGCTGGGTA AATTACAAGAACAAACTATGGACTCTTTGCGCAGCGATCTGCGTGAGAAGAACATTCCTTATGCCGCTGTACGTAAGATT GATAATTACGGCGTCGAAATTCGCTTCCGTGATGCTCAAACGCGTGATGATGGCCTCAGCTATCTGACGTCTCGTCATCG TAACCTGGTTCTCAGCAGTAGCGGTGGCAACCTGATGCGTGCGGTGATGTCGGACGAACGTCTGCGTGAAGCACGTGAAT ACGCCGTACAGCAGAACATCAATATCCTGCGTAATCGTGTGAACCAACTGGGCGTTGCCGAACCGCTGGTACAACGTCAG GGTTCTGACCGCATCGTCGTTGAATTACCGGGTATTCAAGACACGGCGCGCGCGAAAGAAATTCTTGGTGCAACCGCTAC GCTGGAATTCCGTCTGGTCAACAGCGATGCTGATGCGACAGCGGCGGCAAACGGCCGTGTGCCGGGCGATTCCGAAGTGA AGAATATGCGTGACGGTTCACCCGTTGTGCTGTTCAAACGCGTCATCCTGACGGGCGACCACATCACGGATTCCACATCA AGCAATGACGAATACAATCGTCCTCAGGTGAATATTTCTCTGGACAGCGCGGGTGGCAACACCATGTCCAATTTCACCAA AGACAGTATTGGTAAGCTGATGGCGACGCTGTTTGTGGAATACAAAGACAGCGGCAAGAAAGATGCGACGGGCCGTTCAA TACTGGAAAAACACGAAGAAGTGATCAACGTGGCGACGATTCAGTCGCGACTGGGTAACAGCTTCCGTATTACCGGCATT GATAACCCGAATGAAGCGCGTCAGCTTTCTCTGTTGCTGCGTGCGGGTGCGCTGATTGCTCCGATCCAGATCGTGGAAGA ACGTACTATTGGGCCAACGCTGGGGATGCAAAACATCACTCAGGGTCTGGAAGCCTGTTTGTGGGGCTTGATCGCGTCGA TTCTCTTTATGGTTTTCTTCTACAAGAAGTTTGGTGTGATTGCGACCAGTGCATTGGTTGCTAACCTGGTATTGATTGTC GGTGTGATGTCATTGTTACCTGGCGCTACGCTGACCATGCCGGGTATTGCCGGTATCGTGTTGACGTTGGCGGTCGCAGT GGATGCTAACGTATTAATCAACGAACGTATCAAGGAAGAACTCAGTAATGGTCGCTCTATACAGCAGGCTATCCACGAGG GCTACAAAGGTGCATTCAGTTCCATTGTTGATGCGAACGTCACAACGTTGATTAAAGTCATCATCCTGTATGCCGTGGGT ACCGGTTCAATCAAAGGGTTTGCTATTACTACTGCGATTGGGATTGCGACCTCAATGTTTACGGCGATCGTCGGTACTCG TGCCATCGTTAACCTGCTTTACGGCGGTAAACGCATCAACAAGCTGTCTATCTGA Protein sequence : MLVVVLFVGLLYALPNLYGEDPAVQVTGARGTAASETTLIQVQNVLKEQNITSKSIALENGAILARFSNPDIQLRAREAL VNELGEKFVVALNLAPATPTWLRLLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLREKNIPYAAVRKI DNYGVEIRFRDAQTRDDGLSYLTSRHRNLVLSSSGGNLMRAVMSDERLREAREYAVQQNINILRNRVNQLGVAEPLVQRQ GSDRIVVELPGIQDTARAKEILGATATLEFRLVNSDADATAAANGRVPGDSEVKNMRDGSPVVLFKRVILTGDHITDSTS SNDEYNRPQVNISLDSAGGNTMSNFTKDSIGKLMATLFVEYKDSGKKDATGRSILEKHEEVINVATIQSRLGNSFRITGI DNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLWGLIASILFMVFFYKKFGVIATSALVANLVLIV GVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSIQQAIHEGYKGAFSSIVDANVTTLIKVIILYAVG TGSIKGFAITTAIGIATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-118 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-118 | 46 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-119 | 46 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-118 | 46 |
