Gene Information

Name : W5S_3884 (W5S_3884)
Accession : YP_006284819.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Ferrienterobactin receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4188228 - 4190543 bp
Length : 2316 bp
Strand : -
Note : -

DNA sequence :
ATGAAACTACCACAATCGCGCCATTATTTGGCGACGCTCATTGGCGTTAGCTGCGGGATGACGTCGTTTTTGAGTGCGGC
GCAAGCCTCGACCGTTCCTTCAACAGAATCTGCCCCTCAGGTGCAGAATCAGGCCGAAAGTAAAACGTCGGGCGATACGA
TGGTAGTCACGGCCGCAGAGCAAATCCGTCAGGCTCCCGGTGTATCGGTGATTACGGCTGAGGATATCAGCAAACGTCCG
CCCGCTAACGATCTGTCAGAACTGATTCGTACCATGCCGGGCGTTAATCTGTCCGGTAACTCAACCAGTGGCTCACGTGG
CAATAACCGCCAGATCGATATCCGCGGCATGGGGCCAGAAAACACGCTGATTTTGGTGGATGGCAAACCTGTTTCGAGCC
GTGCGGCTGTGCGTTACGGCTGGCGCGGCGAGCGTGACACCCGTGGTGACACCAACTGGGTGCCTGCGGACATGGTGGAG
CGCATTGAAGTGCTGCGTGGCCCGGCTGCCGCGCGCTATGGTAACGGTGCTGCGGGCGGTGTGGTTAACATCATCACCAA
ACAGCCGACGCAAGAATGGCACGGTGCATGGAATAGCTACATGAGTTTCCCTGAAGATAAGGCTGATGGTGCCACCAAAC
GTACCAATTTTAACTTAATGGGAGGTTTAACCGACACGCTTAGCCTTCGCTTATATGGTAATTATAATAAAACACAGGCA
GATGCTTGGAATATCAACGATGGGCATCAGATAACTCCGTTATCAACGGCGGTACCGGCTGGCCGTGAAGGCGTTCGTAA
CAAAGATATCAATGCATTGCTGCGTTGGACATTTATGCCGAAACAAACGTTGGAGTTTGAAACTGGTTTTAGCCGTCAGG
GCAACATCTATGCGGGCGATACTGAGAATAACAATGGTAAAGCGGATACCCAGGCTCTTTACGGTCAGGAAACCAACCGT
ATGTATCGGCAGAAGTATGCGATAACTCACCGCGGCTATTGGGATAGTGGCATAAGTACGCTGTCTTATCTGCAATATGA
AGCTACTCGTAATGCACGAATTTTCGAGCCTTTAGCGGGGGGCCCGGCAGGTCGTCCAACAGGAAACTATCAGTCGACCA
TTAAACTGGATGCTTATACGGCACACAGCGAAGTCAATGTTCCATTTGAGGCATGGTTTAGTCAAACCGCCACCATTGGC
ATGGAGTGGGTGGAACAAAAGATGCACGATCCGTCTTCAAATACACAACCTACCACTGAAGCTGGTAGTGTCGGCTCCAT
TGCTGATACTCATCGTAGCGAGAATATTTCTGCTCGTATCGCTTCTGTTTTTGCAGAAGATAATATCGAATTAACTGATA
GCACTATGCTGACACCAGCACTGCGCCTAGATCATCATAATATCGTTGGTACAAACTGGAGTCCATCGCTGAACTTGTCG
CAGCAGTTGGGAGACGATTTTACCCTGAAGATGGGGATTGCTCGTGCTTACAAAGCGCCGAACCTCTATCAACTTAACCC
CAACTATCTGCTGTATAGCCGTGGCAATGGTTGTTATGGTGCAGGCGCCTGCTATCTGATGGGGAATAACAATCTTGATG
CGGAAACCAGTGTCAACAAAGAGATTGGTATTGAGTTCAAGCGAGATGGGTACCAGGCGGGGGTTACTTATTTCCGCAAT
GATTACCGTAATAAAATTGAGTCGGGTATCCACAAAATCGGCAACGCGGTAGGAGGAAGTAATAAAGATTATCGCAATGC
GAATGTCTATCAGTGGGAAAATGTGCCTAAAGCGTTGGTAGAGGGGCTGGAAGGGTCGTTGGCTATTCCGGTCACCGAGA
CAATAAGCTGGAACAATAATATTACATGGATGCTGCGTTCCGAAAACAAAACAACGGGTGATTACCTATCAATCACACCG
GAGTTTACGCTCAATTCTTCCGTGAGCTGGCAGGCAACAGACGAGCTATCCGTTTTGGCGAACATGACCTGGTACGGGCG
CCAGAAGCCGAAGAAATATAACTATCAAGGTAAAGCAGTGGGATCTATACCGTTGACTGCGGCTTACGATACCCATGAGG
TTAGTCCTTATGCGATCTTTGGTTTGAGTTCAACTTACGAGGTGAATAAAAACCTGAGTATCACTGGTGGGGTGGAAAAT
TTGTTCGACAAGCGCCAATATCGGGCAGGGAATGCTCAGTCGTTGACTGCGACCAACTCTGCGGGTGTAACCAGCATGAC
GTCCTACGGCGCAGGTGCGGCAACCTATAACGAACCGGGACGGGCTTTCTTTGTCAGCGTGAAGACGTCGTTCTAA

Protein sequence :
MKLPQSRHYLATLIGVSCGMTSFLSAAQASTVPSTESAPQVQNQAESKTSGDTMVVTAAEQIRQAPGVSVITAEDISKRP
PANDLSELIRTMPGVNLSGNSTSGSRGNNRQIDIRGMGPENTLILVDGKPVSSRAAVRYGWRGERDTRGDTNWVPADMVE
RIEVLRGPAAARYGNGAAGGVVNIITKQPTQEWHGAWNSYMSFPEDKADGATKRTNFNLMGGLTDTLSLRLYGNYNKTQA
DAWNINDGHQITPLSTAVPAGREGVRNKDINALLRWTFMPKQTLEFETGFSRQGNIYAGDTENNNGKADTQALYGQETNR
MYRQKYAITHRGYWDSGISTLSYLQYEATRNARIFEPLAGGPAGRPTGNYQSTIKLDAYTAHSEVNVPFEAWFSQTATIG
MEWVEQKMHDPSSNTQPTTEAGSVGSIADTHRSENISARIASVFAEDNIELTDSTMLTPALRLDHHNIVGTNWSPSLNLS
QQLGDDFTLKMGIARAYKAPNLYQLNPNYLLYSRGNGCYGAGACYLMGNNNLDAETSVNKEIGIEFKRDGYQAGVTYFRN
DYRNKIESGIHKIGNAVGGSNKDYRNANVYQWENVPKALVEGLEGSLAIPVTETISWNNNITWMLRSENKTTGDYLSITP
EFTLNSSVSWQATDELSVLANMTWYGRQKPKKYNYQGKAVGSIPLTAAYDTHEVSPYAIFGLSSTYEVNKNLSITGGVEN
LFDKRQYRAGNAQSLTATNSAGVTSMTSYGAGAATYNEPGRAFFVSVKTSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 2e-144 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3884 YP_006284819.1 Ferrienterobactin receptor VFG0923 Protein 0.0 63
W5S_3884 YP_006284819.1 Ferrienterobactin receptor VFG0935 Protein 1e-143 51
W5S_3884 YP_006284819.1 Ferrienterobactin receptor VFG1650 Protein 1e-144 51