Gene Information

Name : W5S_4256 (W5S_4256)
Accession : YP_006285184.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Propanediol utilization protein PduA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4587256 - 4587537 bp
Length : 282 bp
Strand : -
Note : -

DNA sequence : 
ATGCAACAAGAAGCATTAGGAATGGTTGAAACAAAAGGTCTGGTTTCCGCAATTGAAGCCGCAGACACCATGGTTAAATC
CGCAAACGTAATGTTGGTGGGTTATGAAAAAATTGGTTCTGGATTAGTGACGGTTATGGTACGCGGCGATGTTGGTGCAG
TAAAAGCCGCAACCGATGCTGGCTCTGCCGCTGCGGGTAAAGTCGGCGAACTGGTATCCGTACATGTCATTCCACGCCCG
CATATTGAAGTGGAAAAAATTCTGCCGAAAGCTGTCAGTTAA

Protein sequence : 
MQQEALGMVETKGLVSAIEAADTMVKSANVMLVGYEKIGSGLVTVMVRGDVGAVKAATDAGSAAAGKVGELVSVHVIPRP
HIEVEKILPKAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 64
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 7e-19 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-18 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_4256 YP_006285184.1 Propanediol utilization protein PduA VFG1598 Protein 9e-18 64
W5S_4256 YP_006285184.1 Propanediol utilization protein PduA VFG1596 Protein 3e-19 63
W5S_4256 YP_006285184.1 Propanediol utilization protein PduA VFG1597 Protein 4e-18 62