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Name : W5S_0963 (W5S_0963) Accession : YP_006281953.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Type VI secretion protein, EvpB/VC_A0108 family Function : - COG functional category : - COG ID : - EC number : - Position : 1065293 - 1066771 bp Length : 1479 bp Strand : + Note : - DNA sequence : ATGTCAATAGTTGAAGAACAGGTTCAGGCAGGAGCCGCCAGTGCTTCTGGATCGTTGCTTGATGACATCATGGCTCAAGC GCGTATCAGCCCGGTTGATGAAGGCTACAGCGTGGCTAAACAGGGCATTGCCGCGCTGGTCGCTAACATTCTTGATAGCG GTAATGCAGCAGAACCCGTGAATAAAGCGCTGGTCGATAGCATGATCGTCGAACTGGACAAAAAACTTAGCAAGCAGATT GACGTGATTCTGCATGCAAAAGAATTACAGGAACTGGAATCTTCCTGGCGTTCGATGAAACTGCTTATCGATCGCACTGA TTTCCGTGAAAACATCAAACTGTTGGTGTTGCATGCGACGAAAGAAGAGCTGTTGGAAGATTTCGAATTCGCCCCTGAAA TCTCACAGTCTGGCTTCTATAAGCACGTGTATTCCAGCGGTTACGGCCAGTTCGGCGGTCAGCCTATTGGTGGCGTGATC GGTGACTATGCGCTGACGCAAAGCTCACCAGACATCAAACTGATGCAGTATGTCAGCGCCGTTGGCGCGATGGCGCATGC ACCGTTCATCTCTTCCGTTGCACCAACCTTCTTTGGCGTGGATCGCTTCACCGATCTGCCTTCAATCAAAGATCTGAAAT CCGTTTTCGAAGGCCCTGCCTACACGAAATGGCGTTCGCTGCGTGAATCTGAAGACGGCCGCTATCTGGGGCTGACGGCA CCGCGCTTCCTGGCTCGCTTGCCTTATGATCCGGTAGAAAACCCGATTAAGGGTTTCAACTACAAGGAAGATATCAGCAC CGATCACGAACACTATCTGTGGGGCAATACCGCTTATCTGATGGGAACGGCATTGACGGACAGTTTCGCGAAATACCGCT GGTGTCCGAACATTATCGGTCCACAGAGCGGTGGGGCGATTACCGACCTGCCGGTGCATGTTTATGAAGCGATGGGCCAA CTTCAGGCCAAAATCCCGACTGAAGTGCTGATCACCGATCGTCGCGAATATGAAATGGCCGAAGAAGGCTTTATCACGCT GACGATGCGTAAAGACAGTGACAATGCCGCCTTCTTCTCCGCTAACTCAGTGCAGAAGCCGAAGGTGTTCCCAAACACCA AGGAAGGCAAAGAAGCGGAAACCAACTACAAGCTGGGTACGCAACTGCCGTACATGTTCATCATCAACCGTCTGGCGCAC TACATCAAAGTGCTTCAGCGTGAACAGATTGGCTCATGGAAAGAGCGTCAGGATCTTGAACGTGAGTTGAATACCTGGAT TAAACAGTACATCGCCGATCAGGAAAACCCGCCGGCAGATGTCCGTAGCCGTCGTCCTCTGCGTGCTGCACAAATCAAAG TGCTGGATGTGGAAGGAGAACCAGGTTGGTATCAGGTCACTATGTCTGTGCGCCCGCACTTCAAGTACATGGGGGCAAAC TTTGAGCTGTCGCTGGTAGGGCGTCTGGATAAGGAATAA Protein sequence : MSIVEEQVQAGAASASGSLLDDIMAQARISPVDEGYSVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQI DVILHAKELQELESSWRSMKLLIDRTDFRENIKLLVLHATKEELLEDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVI GDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDRFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA PRFLARLPYDPVENPIKGFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQ LQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAH YIKVLQREQIGSWKERQDLERELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN FELSLVGRLDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 4e-171 | 70 |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-171 | 70 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 3e-146 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_0963 | YP_006281953.1 | Type VI secretion protein, EvpB/VC_A0108 family | VFG2093 | Protein | 0.0 | 77 |
| W5S_0963 | YP_006281953.1 | Type VI secretion protein, EvpB/VC_A0108 family | VFG2475 | Protein | 3e-154 | 60 |
