Gene Information

Name : D7S_01950 (D7S_01950)
Accession : YP_006287503.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1822652 - 1824562 bp
Length : 1911 bp
Strand : +
Note : -

DNA sequence :
ATGCTTCCCGAATTTGGTTTTATCTCCCTCCTCCTTGCCACCATGAGCGCGTTGCTTCTCGCGGTGGTGCCGCAGCTTGG
GCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGTCTA
TTTCCATCTTGGCATATTCCTTTGCGGCAGATGATTTCACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCG
ACCTTTTTTAAAATCGCCGCGACCTGGGGCGGGTATGAAGGATCTATGTTGTTTTGGTTGTTTTCGCTTGCGGTTTGGGT
GGTGTTGTTTGCGTTATTTAACCGAAAAAACGACCGCACTTTTGTGGCGCAAAGTCTGGTGATTTTGGGGCTGATCTGTT
TTAGTTTCGCCGTGTTTATCGTCTTTTTCTCTAATCCGTTCGGACGAATTTTCCCGGCGCCATTGGAAGGACGGGATTTG
AATCCGATGTTGCAGGATGTCGGTTTAATTTTCCACCCGCCGTTGCTTTACCTCGGTTATGTGGGCTTTGCGGTGAATTT
TGCCATCAGTATTACCGCTTTGCTTCATCAGCATTTAGAACGTCAGATTGCCCACATTATGCGGGGTTGGGTGTCGGTGT
CATGGTTGTTTTTAACCCTGGGCATCGTGCTTGGCGCCTGTTGGGCGTATTACGAACTGGGCTGGGGCGGTTGGTGGTTC
TGGGATCCGGTGGAAAATGCGTCGCTCATGCCGTGGTTGCTCGGCTTGGCATTGTTGCACAGTTTAATCGTCAGCGAAAA
ACGCGGAATTTTTAATTACTGGACGACCTTATTTTCCTTGCTGGCATTTGCGTTCAGCGTATTAGGCACGTTTATCGTGC
GCTCCGGTGCGCTTACCTCCGTACACGCTTTTGCTGTGGACAGCCAGCGCGGTTCGGCGTTATTGTTGATTTTCTTCCTA
CTCGCCGTGGGTTCTCTCGGTTTATTCGCGTTCAAAGCCAATTTGCAGCAACGCCGCGTCAAATTAACGCTGTTTTCCAA
AGAAAGTGCGGTGCTTTTTTTGAATGTTTTATTGAGTATCGCCACCGTTAGCACCTTTCTCGGCACCTTTTATCCTATGC
TGTTTCAAACCATGAATTGGGGCTCTATTTCCGTCGGCGCGCCTTATTTCAACAGCATTTTCTTGCCGTTGCTTACGCTG
ATTTTAATCGCCATGGTGCTTTCCCTCGGCTTACACTGGGCGAAGGCGGACAAGGGTGTTTTACTTAAACGTACAGCGTT
GTTACTGCCATCTTTGTTGATCGCTTATTTTGCGATTCGTCAGGTGATGCAGAACGACAGCGCTTTACAATTTAACCTGA
CGGCATATTTTCTGTTCACCTTGGCGATTTGGCTCTTATTGGCGACCTTATGGCAAAATTGGCGCCGGTTAAATGTTTCC
CATTACGCCATGATTTTCGCCCACAGCGGTGTTGCCATTGCGACCATGGGCGCGGTGATGAGCAGTTACTTCGGCAGTGA
AATTGGCGTGCGTTTATCGCCGCAACAAAGCCAAACTTTGGGGCAATTCGATTTCCGATATGTGCGTTTTTCCAATGAAA
TCGGACCAAATTTTACCGCTGAAGTGGCGGACTTTCATGTCACGACAAACGGTAAACCTTATGCGGATTTGCAGCCGGAG
CGCCGCTATTATGACGTGCGTACTATGACCATGAGCGAAGTGGGGCTTGCCGGCGGGTTTTGGGGCGATTTGTATATTGT
GATGGGCGATCCGCTCGGCAAAGGCGAGTTTACCTTCCGCCTGCATTACAAACCGCTGATTCGCTGGTTATGGTTCGGCG
GTGTGTTAATGGCGTTCGGGGCGTTGTGTTCTCTATTGACGATGAAGCGAAAAGGAAAGCGTGATGAATAG

Protein sequence :
MLPEFGFISLLLATMSALLLAVVPQLGLWLRKPALTQLAWGLSYCFGLFTLASISILAYSFAADDFTLEYVAAHSNSQLP
TFFKIAATWGGYEGSMLFWLFSLAVWVVLFALFNRKNDRTFVAQSLVILGLICFSFAVFIVFFSNPFGRIFPAPLEGRDL
NPMLQDVGLIFHPPLLYLGYVGFAVNFAISITALLHQHLERQIAHIMRGWVSVSWLFLTLGIVLGACWAYYELGWGGWWF
WDPVENASLMPWLLGLALLHSLIVSEKRGIFNYWTTLFSLLAFAFSVLGTFIVRSGALTSVHAFAVDSQRGSALLLIFFL
LAVGSLGLFAFKANLQQRRVKLTLFSKESAVLFLNVLLSIATVSTFLGTFYPMLFQTMNWGSISVGAPYFNSIFLPLLTL
ILIAMVLSLGLHWAKADKGVLLKRTALLLPSLLIAYFAIRQVMQNDSALQFNLTAYFLFTLAIWLLLATLWQNWRRLNVS
HYAMIFAHSGVAIATMGAVMSSYFGSEIGVRLSPQQSQTLGQFDFRYVRFSNEIGPNFTAEVADFHVTTNGKPYADLQPE
RRYYDVRTMTMSEVGLAGGFWGDLYIVMGDPLGKGEFTFRLHYKPLIRWLWFGGVLMAFGALCSLLTMKRKGKRDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 1e-99 43
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 3e-96 41