Gene Information

Name : D7S_00603 (D7S_00603)
Accession : YP_006286266.1
Strain : Aggregatibacter actinomycetemcomitans D7S-1
Genome accession: NC_017846
Putative virulence/resistance : Virulence
Product : hemolysin secretion protein HlyB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 595319 - 597442 bp
Length : 2124 bp
Strand : -
Note : -

DNA sequence :
ATGGACTCACAGAAAAATACTAATCTTGCCCTTCAGGCATTGGAAGTACTGGCTCAATATCATAATATTTCAATTAACCC
TGAAGAAATAAAACATAAATTTGATATAGATGGGCATGGGCTGAACCAAACTAAATGGTTGCTTGCAGCAAGATCACTTG
GATTAAAAGTAAGAACTACGAACAAAACAATTGATAGATTACCTTTTTTACATTTACCGGTATTGGCTTGGCGTGATGAT
GGTGACCACTTTATTTTATTGAAAATAGATCAAGAAACCGATCGTTACCTCATTTTTGATCTAATGCAAAAAAATCCTAT
TGTTTTAGACAAAAATGAATTTGAAGAACGTTATCAAAGCAAGGTGATTTTAGTTGCGTCACGCGCATCTATTGTAGGAA
ATTTAGCAAAATTCGATTTTACCTGGTTTATTCCTGCTGTAATTAAATACCGCAAAATTTTTATAGAAACGTTAATCGTT
TCTATATTTTTGCAAATTTTTGCACTGATTACACCGCTATTTTTTCAAGTCGTGATGGATAAGGTCTTGGTTCACCGTGG
ATTTTCAACATTGAATGTGATTACAGTGGCTCTTGCTATTGTAGTCTTATTTGAAATAGTCTTGGGGGGGCTGAGAACCT
ATGTGTTTGCTCATAGCACAAGTCGTATTGATGTCGAACTGGGAGCAAGACTTTTTCGTCACTTATTAGCTTTACCGATT
TCTTATTTTGAAGCTCGTCGGGTTGGGGATACGGTGGCTCGTGTTCGTGAATTAGATCAAATTCGGAATTTCTTAACAGG
GCAGGCACTTACCTCTATTTTAGACTTGTTATTCTCTTTTATTTTCTTCGCCGTTATGTGGTATTACAGCCCAAAATTAA
CATTAGTTGTACTCGGTTCTTTACCTTGTTATGTCATTTGGTCTGTTTTTATTAGTCCTATTCTTAGGAGACGGCTTGAT
GATAAGTTCGCAAGAAATGCCGACAATCAGTCTTTTCTTGTTGAATCAGTGACTGCCATTAATACAATTAAAGCGATGGC
TATTTCTCCTCAAATGACTAACATTTGGGATAAACAGTTAGCGAGTTATGTTGCTGCGAGTTTTAAAGTGACTGTACTTG
CAACGATCGGACAGCAAGGTATCCAACTGATCCAGAAAGCCGTTATGGTGATCAACCTATGGCTTGGCGCACATTTAGTT
ATTTCCGGTGATTTAAGTATTGGTCAGCTAATTGCATTTAATATGCTTGCGGGGCAAATTATTAGCCCTGTGATTCGTTT
AGCCCAGATCTGGCAAGATTTCCAACAGGTCGGTATTTCTGTTACTCGCTTAGGTGACGTGCTTAATTCGCCTACAGAGA
ATAATACCGCCTCAGTATCATTACCAGAAATCCAGGGTGAGATTAGTTTTAGAAATATTAAGTTCCGCTATAAACCGGAT
TCCCCTATGATTTTAAACAATATTAACTTAGATATCAGCCAGGGAGAAGTGATTGGTATTGTTGGTCGTTCAGGTTCGGG
AAAAAGTACGCTTACTAAACTCATCCAACGTTTTTATATTCCGGAGCAGGGGCAGGTCTTAATTGACGGTCACGATTTGG
CGCTAGCCGATCCAAACTGGTTGCGCCGGCAAGTCGGTGTCGTCTTGCAAGATAATGTGTTGCTTAATCGAAGTATCAGA
GAGAATATTGCGTTAACCAATCCGGGAATGCCAATGGAAAAGGTTATTGCCGCGGCAAAACTTGCGGGAGCGCATGATTT
TATTTCTGAATTAAGAGAAGGTTATAACACGGTTGTGGGGGAACAGGGAGCCGGTCTGTCCGGAGGACAACGTCAACGGA
TCGCGATAGCAAGGGCACTAGTCAATAACCCAAGGATTTTGATTTTTGATGAAGCAACCAGTGCACTTGATTACGAATCT
GAAAATATCATTATGCATAATATGCATAAAATTTGCCAAAATCGTACTGTGCTTATCATTGCTCACCGCCTTTCTACTGT
AAAAAATGCTGATCGCATTATTGTGATGGACAAAGGTGAAATCATCGAACAAGGCAAGCATCAAGAATTACTGAAAGATG
AAAAAGGTTTTTACTCTTATTTACACCAATTACAAGTAAATTAA

Protein sequence :
MDSQKNTNLALQALEVLAQYHNISINPEEIKHKFDIDGHGLNQTKWLLAARSLGLKVRTTNKTIDRLPFLHLPVLAWRDD
GDHFILLKIDQETDRYLIFDLMQKNPIVLDKNEFEERYQSKVILVASRASIVGNLAKFDFTWFIPAVIKYRKIFIETLIV
SIFLQIFALITPLFFQVVMDKVLVHRGFSTLNVITVALAIVVLFEIVLGGLRTYVFAHSTSRIDVELGARLFRHLLALPI
SYFEARRVGDTVARVRELDQIRNFLTGQALTSILDLLFSFIFFAVMWYYSPKLTLVVLGSLPCYVIWSVFISPILRRRLD
DKFARNADNQSFLVESVTAINTIKAMAISPQMTNIWDKQLASYVAASFKVTVLATIGQQGIQLIQKAVMVINLWLGAHLV
ISGDLSIGQLIAFNMLAGQIISPVIRLAQIWQDFQQVGISVTRLGDVLNSPTENNTASVSLPEIQGEISFRNIKFRYKPD
SPMILNNINLDISQGEVIGIVGRSGSGKSTLTKLIQRFYIPEQGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIR
ENIALTNPGMPMEKVIAAAKLAGAHDFISELREGYNTVVGEQGAGLSGGQRQRIAIARALVNNPRILIFDEATSALDYES
ENIIMHNMHKICQNRTVLIIAHRLSTVKNADRIIVMDKGEIIEQGKHQELLKDEKGFYSYLHQLQVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 84
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 83
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D7S_00603 YP_006286266.1 hemolysin secretion protein HlyB VFG0907 Protein 0.0 84
D7S_00603 YP_006286266.1 hemolysin secretion protein HlyB VFG1501 Protein 0.0 83
D7S_00603 YP_006286266.1 hemolysin secretion protein HlyB VFG1557 Protein 0.0 83
D7S_00603 YP_006286266.1 hemolysin secretion protein HlyB VFG0841 Protein 0.0 71
D7S_00603 YP_006286266.1 hemolysin secretion protein HlyB VFG1269 Protein 0.0 53