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Name : Q7C_2363 (Q7C_2363) Accession : YP_006294184.1 Strain : Methylophaga sp. JAM7 Genome accession: NC_017856 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2367645 - 2369501 bp Length : 1857 bp Strand : + Note : PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; TC 3.A.5.1.1 DNA sequence : ATGAACCGATATCCTTTGTGGAAAAACCTGTTGTTGTTAGTGGTGATAGCCACGGCGGTGATTTATGCCATGCCAAATTT ATATGGCGATGATCCGGCAGTACAAATTTCGGCGGGTCGTCAGGCATCTCTTGATAATGCCTTGGTGAGCAACGTTGAAA CGCAGCTTAAAGAGGCCGATCTCCCCTATAAAGGCCTGACCTTGGAAGATAATCGCCTACTAATTCGTTTTGCGGATGCG GACAGTCAATTAAAAGCACGTGAAATGATTGCCGGCTCGCTCGCAGAGCAAGACTATATCGTGGCGCTAAACTTGGCACC AACTACGCCAGAATGGTTAACAGGCTTAAAAGCAGAGCCGATGAATCTGGGGCTGGATTTGCGCGGTGGGGTGCATTTCC TGATGGAGGTGGACATGCAAGCTGTCCAGCATCAGGCGCTAACCGGGATTGCAGATGACCTCAGATTGTTATTACGGGAA TCGGTCATCCGATATACCCGGGTCGAGGTAGAAGGCGATACCTTATTTTTGGGTTTCCGTGATGCAACCGAGCGTGACAA GGCAGAACAAGAAATCAGCCGCGACTACCCTGACGTTGTTGTGTCAACTGATGAGTCGGCTGACCGTCCCACCCTCGCCT TGAACATGACGGAAACGTTTTTGCGGGAAACGCAGACACTGGCACTACAGCAAAACATCACGACGTTGCGTAACCGCATT AACGAATTAGGGGTCGCGGAGCCAACGGTACAACAGCAAGGTCAGAATCGGATTGTGGTGCAATTACCCGGCGTTCAAGA TACCGCGCAGGCCAAAAAAATCCTGGGTGCGACGGCAACACTGGAATTTCGGTTAGTCGATTTTGAAAGTGATGTGCAGT CGGCTGTAAACGGTCGCGTACCGGCTAATTCTGAATTATTTAATCACCGCGATGGTACGCCTTACTTGTTAAACAAGCGG GTTATGCTGACTGGTGAAAACATCATTAATGCTGCCTCAACGCTTGATGCACAAACGAATTCACCGGCGGTTTCGGTGAC CATTGATGGTAAGGGTGCGCGGATATTCAGTAATGTGACCGGTGACAATATCGGCAACCCAATGGCCGTGGTTTTTATCG AGTCAAAAAGTGAGACTGAAGTCGTTGCTGGGGAAGAGGTTCGTGTCCGTAAGCAATTCCCGGAAATTATTAGTGTCGCG ACAATTCGGGATCAGCTGGGTAAAAAGTTTCAAATCACGGGGCTGGATAGTACCACCGAGGCGCGGGATTTAGCGTTATT ACTAAGAGCAGGTGCATTAGCGGCGCCAATTGAGATTGTTGAAGAACGCACTGTCGGGCCAAGTATGGGGCAGGAAAATA TCGACAAAGGCTTTAAGTCCGTCGTTATCGGTTTAGTGCTCGTATTGGTCTTTATGGCTGTCTGGTATCGGGTGTTTGGC CTGGTTGCGAATCTGGCGCTTGCCGTTAACCTGGTGTTGCTGGTGGCGTTATTATCTATGCTGCAAGCCACACTGACTAT GCCGGGTATTGCTGGTATCGTCTTGACGGTGGGGATGGCAGTCGATGCCAATGTATTGATTTTTGAACGTATTCGCGAAG AGTTGCATATCGGCAATAGCCCGCAGGCCAGTATTCGCGCCGGTTATGATAAGGCGCTGTCTACCATCGCCGATGCCAAT GTGACGACCTTAATTGCTGCCGTAGTACTGTTCGGCTTTGGTACCGGGACCATCAAAGGTTTTGCTGTCACCTTGTCGCT GGGGATTTTAACGTCCATGTTTACTGCCATCATGGGTACGCGGGCTTTAGTTAATTTGATTTATGGTCGCCAGCACCGGC CAGCGCTGTCGATTTAA Protein sequence : MNRYPLWKNLLLLVVIATAVIYAMPNLYGDDPAVQISAGRQASLDNALVSNVETQLKEADLPYKGLTLEDNRLLIRFADA DSQLKAREMIAGSLAEQDYIVALNLAPTTPEWLTGLKAEPMNLGLDLRGGVHFLMEVDMQAVQHQALTGIADDLRLLLRE SVIRYTRVEVEGDTLFLGFRDATERDKAEQEISRDYPDVVVSTDESADRPTLALNMTETFLRETQTLALQQNITTLRNRI NELGVAEPTVQQQGQNRIVVQLPGVQDTAQAKKILGATATLEFRLVDFESDVQSAVNGRVPANSELFNHRDGTPYLLNKR VMLTGENIINAASTLDAQTNSPAVSVTIDGKGARIFSNVTGDNIGNPMAVVFIESKSETEVVAGEEVRVRKQFPEIISVA TIRDQLGKKFQITGLDSTTEARDLALLLRAGALAAPIEIVEERTVGPSMGQENIDKGFKSVVIGLVLVLVFMAVWYRVFG LVANLALAVNLVLLVALLSMLQATLTMPGIAGIVLTVGMAVDANVLIFERIREELHIGNSPQASIRAGYDKALSTIADAN VTTLIAAVVLFGFGTGTIKGFAVTLSLGILTSMFTAIMGTRALVNLIYGRQHRPALSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-112 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-112 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-112 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-112 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 48 |
